Short-sequence DNA repeats in prokaryotic genomes

A Van Belkum, S Scherer, L Van Alphen… - Microbiology and …, 1998 - Am Soc Microbiol
Short-sequence DNA repeat (SSR) loci can be identified in all eukaryotic and many
prokaryotic genomes. These loci harbor short or long stretches of repeated nucleotide …

A bacterial siren song: intimate interactions between Neisseria and neutrophils

AK Criss, HS Seifert - Nature Reviews Microbiology, 2012 - nature.com
Neisseria gonorrhoeae and Neisseria meningitidis are Gram-negative bacterial pathogens
that are exquisitely adapted for growth at human mucosal surfaces and for efficient …

Computational analysis of bacterial RNA-Seq data

R McClure, D Balasubramanian, Y Sun… - Nucleic acids …, 2013 - academic.oup.com
Recent advances in high-throughput RNA sequencing (RNA-seq) have enabled
tremendous leaps forward in our understanding of bacterial transcriptomes. However …

Identification of vaccine candidates against serogroup B meningococcus by whole-genome sequencing

M Pizza, V Scarlato, V Masignani, MM Giuliani, B Arico… - Science, 2000 - science.org
Neisseria meningitidis is a major cause of bacterial septicemia and meningitis. Sequence
variation of surface-exposed proteins and cross-reactivity of the serogroup B capsular …

Improved prediction of bacterial genotype-phenotype associations using interpretable pangenome-spanning regressions

JA Lees, TT Mai, M Galardini, NE Wheeler… - MBio, 2020 - Am Soc Microbiol
Discovery of genetic variants underlying bacterial phenotypes and the prediction of
phenotypes such as antibiotic resistance are fundamental tasks in bacterial genomics …

Neisseria gonorrhoeae secretes chromosomal DNA via a novel type IV secretion system

HL Hamilton, NM Domínguez, KJ Schwartz… - Molecular …, 2005 - Wiley Online Library
The process of DNA donation for natural transformation of bacteria is poorly understood and
has been assumed to involve bacterial cell death. Recently in Neisseria gonorrhoeae we …

Neisseria gonorrhoeae acquires mutations in analogous regions of gyrA and parC in fluoroquinolone‐resistant isolates

RJ Belland, SG Morrison, C Ison… - Molecular …, 1994 - Wiley Online Library
Neisseria gonorrhoeae homologues of gyrA and parC have been identified using
hybridization probes generated from conserved regions of diverse gyrA genes. These genes …

Prokaryotic genome size and SSU rDNA copy number: estimation of microbial relative abundance from a mixed population

GB Fogel, CR Collins, J Li, CF Brunk - Microbial ecology, 1999 - Springer
A bstract Determination of the relative abundance of a specific prokaryote in an
environmental sample is of major interest in applied and environmental microbiology …

[图书][B] Pulsed field gel electrophoresis: a practical guide

B Birren, E Lai - 2012 - books.google.com
Pulsed Field Gel Electrophoresis: A Practical Guide is the first laboratory manual to describe
the theory and practice of this technique. Based on the authors' experience developing …

A variable genetic island specific for Neisseria gonorrhoeae is involved in providing DNA for natural transformation and is found more often in disseminated infection …

JP Dillard, HS Seifert - Molecular microbiology, 2001 - Wiley Online Library
Neisseria gonorrhoeae (the gonococcus) is the causative agent of the sexually transmitted
disease gonorrhoea. Most gonococcal infections remain localized to the genital tract but, in …