Discovery of novel crustacean and cephalopod flaviviruses: insights into the evolution and circulation of flaviviruses between marine invertebrate and vertebrate hosts

R Parry, S Asgari - Journal of Virology, 2019 - Am Soc Microbiol
Most described flaviviruses (family Flaviviridae) are disease-causing pathogens of
vertebrates maintained in zoonotic cycles between mosquitoes or ticks and vertebrate hosts …

Comparative genomic analysis of innate immunity reveals novel and conserved components in crustacean food crop species

AG Lai, AA Aboobaker - BMC genomics, 2017 - Springer
Background Growing global demands for crustacean food crop species have driven large
investments in aquaculture research worldwide. However, large-scale production is …

De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups

Y Cogne, D Degli-Esposti, O Pible, D Gouveia… - Scientific Data, 2019 - nature.com
Gammarids are amphipods found worldwide distributed in fresh and marine waters. They
play an important role in aquatic ecosystems and are well established sentinel species in …

The diversity of opsins in Lake Baikal amphipods (Amphipoda: Gammaridae)

P Drozdova, A Kizenko, A Saranchina, A Gurkov… - BMC Ecology and …, 2021 - Springer
Background Vision is a crucial sense for the evolutionary success of many animal groups.
Here we explore the diversity of visual pigments (opsins) in the transcriptomes of amphipods …

Moderate reductions in dissolved oxygen may compromise performance in an ecologically-important estuarine invertebrate

M Collins, O Tills, LM Turner, MS Clark, JI Spicer… - Science of the Total …, 2019 - Elsevier
Coastal ecosystems, including estuaries, are increasingly pressured by expanding hypoxic
regions as a result of human activities such as increased release of nutrients and global …

[HTML][HTML] Transcriptomic data on the transgenerational exposure of the keystone amphipod Gammarus locusta to simvastatin

T Neuparth, AM Machado, R Montes, R Rodil, S Barros… - Data in Brief, 2020 - Elsevier
The use of transcriptomics data brings new insights and works as a powerful tool to explore
the molecular mode of action (MoA) of transgenerational inheritance effects of contaminants …

[HTML][HTML] Complete transcriptome assembly and annotation of a critically important amphipod species in freshwater ecotoxicological risk assessment: Gammarus …

DR Caputo, SC Robson, I Werner, AT Ford - Environment international, 2020 - Elsevier
Because of their crucial role in ecotoxicological risk assessment, amphipods (Crustacea) are
commonly employed as model species in a wide range of studies. However, despite their …

De novo transcriptome assembly of the amphipod Gammarus chevreuxi exposed to chronic hypoxia

M Collins, O Tills, JI Spicer, M Truebano - Marine Genomics, 2017 - Elsevier
Environmental hypoxia is becoming more prevalent in aquatic environments due to
eutrophication and climate change. While the ecological and physiological responses of …

[HTML][HTML] Transcriptome of the freshwater amphipod Gammarus pulex hepatopancreas.

E Gismondi, JP Thomé - Genomics Data, 2016 - europepmc.org
So far, ecotoxicological studies used biomarkers of exposure or of effects in order to
investigate the impacts of contaminated areas on biota (Peakall, 1994 [6]). However …

Identification of Candidate Genes for the Plateau Adaptation of a Tibetan Amphipod, Gammarus lacustris, Through Integration of Genome and Transcriptome …

S Jin, C Bian, S Jiang, S Sun, L Xu, Y Xiong… - Frontiers in …, 2019 - frontiersin.org
The amphipod Gammarus lacustris has been distributing in the Tibetan region with well-
known uplifts of the Tibetan plateau. It is hence considered as a good model for investigating …