Medical image processing on the GPU–Past, present and future

A Eklund, P Dufort, D Forsberg, SM LaConte - Medical image analysis, 2013 - Elsevier
Graphics processing units (GPUs) are used today in a wide range of applications, mainly
because they can dramatically accelerate parallel computing, are affordable and energy …

[HTML][HTML] Medical image segmentation on GPUs–A comprehensive review

E Smistad, TL Falch, M Bozorgi, AC Elster… - Medical image …, 2015 - Elsevier
Segmentation of anatomical structures, from modalities like computed tomography (CT),
magnetic resonance imaging (MRI) and ultrasound, is a key enabling technology for medical …

Accelerated profile HMM searches

SR Eddy - PLoS computational biology, 2011 - journals.plos.org
Profile hidden Markov models (profile HMMs) and probabilistic inference methods have
made important contributions to the theory of sequence database homology search …

Software traceability with topic modeling

HU Asuncion, AU Asuncion, RN Taylor - Proceedings of the 32nd ACM …, 2010 - dl.acm.org
Software traceability is a fundamentally important task in software engineering. The need for
automated traceability increases as projects become more complex and as the number of …

Accelerating compute intensive medical imaging segmentation algorithms using hybrid CPU-GPU implementations

MA Alsmirat, Y Jararweh, M Al-Ayyoub… - Multimedia Tools and …, 2017 - Springer
Medical image processing is one of the most famous image processing fields in this era.
This fame comes because of the big revolution in information technology that is used to …

Accelerating 3D medical volume segmentation using GPUs

M Al-Ayyoub, S AlZu'bi, Y Jararweh… - Multimedia Tools and …, 2018 - Springer
Medical images have an undeniably integral role in the process of diagnosing and treating
of a very large number of ailments. Processing such images (for different purposes) can …

[HTML][HTML] A survey of GPU-based medical image computing techniques

L Shi, W Liu, H Zhang, Y Xie… - Quantitative imaging in …, 2012 - ncbi.nlm.nih.gov
Medical imaging currently plays a crucial role throughout the entire clinical applications from
medical scientific research to diagnostics and treatment planning. However, medical …

Parallel-META 2.0: enhanced metagenomic data analysis with functional annotation, high performance computing and advanced visualization

X Su, W Pan, B Song, J Xu, K Ning - PloS one, 2014 - journals.plos.org
The metagenomic method directly sequences and analyses genome information from
microbial communities. The main computational tasks for metagenomic analyses include …

Redefining the Role of the CPU in the Era of CPU-GPU Integration

M Arora, S Nath, S Mazumdar, SB Baden… - IEEE Micro, 2012 - ieeexplore.ieee.org
We've seen the quick adoption of GPUs as general-purpose computing engines in recent
years, fueled by high computational throughput and energy efficiency. There is heavier …

A framework for 3D model-based visual tracking using a GPU-accelerated particle filter

JA Brown, DW Capson - IEEE transactions on visualization and …, 2011 - ieeexplore.ieee.org
A novel framework for acceleration of particle filtering approaches to 3D model-based,
markerless visual tracking in monocular video is described. Specifically, we present a …