From a melt of rings to chromosome territories: the role of topological constraints in genome folding
We review pro and contra of the hypothesis that generic polymer properties of topological
constraints are behind many aspects of chromatin folding in eukaryotic cells. For that …
constraints are behind many aspects of chromatin folding in eukaryotic cells. For that …
Single-polymer dynamics under constraints: scaling theory and computer experiment
A Milchev - Journal of Physics: Condensed Matter, 2011 - iopscience.iop.org
The relaxation, diffusion and translocation dynamics of single linear polymer chains in
confinement is briefly reviewed with emphasis on the comparison between theoretical …
confinement is briefly reviewed with emphasis on the comparison between theoretical …
Tube theory of entangled polymer dynamics
TCB McLeish - Advances in physics, 2002 - Taylor & Francis
The dynamics of entangled flexible polymers is dominated by physics general to many
chemical systems. It is an appealing interdisciplinary field where experimental and …
chemical systems. It is an appealing interdisciplinary field where experimental and …
Unexpected power-law stress relaxation of entangled ring polymers
M Kapnistos, M Lang, D Vlassopoulos… - Nature materials, 2008 - nature.com
After many years of intense research, most aspects of the motion of entangled polymers
have been understood. Long linear and branched polymers have a characteristic …
have been understood. Long linear and branched polymers have a characteristic …
Molecular dynamics simulation study of nonconcatenated ring polymers in a melt. I. Statics
Molecular dynamics simulations were conducted to investigate the structural properties of
melts of nonconcatenated ring polymers and compared to melts of linear polymers. The …
melts of nonconcatenated ring polymers and compared to melts of linear polymers. The …
The role of topological constraints in the kinetics of collapse of macromolecules
AY Grosberg, SK Nechaev… - Journal de …, 1988 - jphys.journaldephysique.org
It is shown that the kinetics of collapse of a polymer coil consisting of N segments after an
abrupt decrease of temperature is a two-stage process if N>> Ne. The first stage takes a time …
abrupt decrease of temperature is a two-stage process if N>> Ne. The first stage takes a time …
Self-similar conformations and dynamics in entangled melts and solutions of nonconcatenated ring polymers
A scaling model of self-similar conformations and dynamics of nonconcatenated entangled
ring polymers is developed. Topological constraints force these ring polymers into compact …
ring polymers is developed. Topological constraints force these ring polymers into compact …
Network modulus and superelasticity
SP Obukhov, M Rubinstein, RH Colby - Macromolecules, 1994 - ACS Publications
We discuss the elastic modulus G and swelling/deswelling behavior of networks as a
function of their concentration< t> and their preparation state. Simple scaling ideas …
function of their concentration< t> and their preparation state. Simple scaling ideas …
Dynamics of a ring polymer in a gel
SP Obukhov, M Rubinstein, T Duke - Physical review letters, 1994 - APS
We present a simple scaling theory of the dynamics of a ring polymer in a gel. In the
absence of excluded volume interactions, we predict that the translational diffusion …
absence of excluded volume interactions, we predict that the translational diffusion …
Annealed lattice animal model and Flory theory for the melt of non-concatenated rings: towards the physics of crumpling
AY Grosberg - Soft Matter, 2014 - pubs.rsc.org
A Flory theory is constructed for a long polymer ring in a melt of unknotted and non-
concatenated rings. The theory assumes that the ring forms an effective annealed branched …
concatenated rings. The theory assumes that the ring forms an effective annealed branched …