Metagenomics: An effective approach for exploring microbial diversity and functions

NN Nam, HDK Do, KT Loan Trinh, NY Lee - Foods, 2023 - mdpi.com
Various fields have been identified in the “omics” era, such as genomics, proteomics,
transcriptomics, metabolomics, phenomics, and metagenomics. Among these …

The genetic history of the Southern Arc: A bridge between West Asia and Europe

I Lazaridis, S Alpaslan-Roodenberg, A Acar, A Açıkkol… - Science, 2022 - science.org
By sequencing 727 ancient individuals from the Southern Arc (Anatolia and its neighbors in
Southeastern Europe and West Asia) over 10,000 years, we contextualize its Chalcolithic …

Ancient dental calculus reveals oral microbiome shifts associated with lifestyle and disease in Great Britain

AS Gancz, AG Farrer, MP Nixon, S Wright… - Nature …, 2023 - nature.com
The prevalence of chronic, non-communicable diseases has risen sharply in recent
decades, especially in industrialized countries. While several studies implicate the …

A Journey into the Evolution of Human Host-Oral Microbiome Relationship through Ancient Dental Calculus: A Scoping Review

A Putrino, E Marinelli, A Galeotti, GF Ferrazzano… - Microorganisms, 2024 - mdpi.com
One of the most promising areas of research in palaeomicrobiology is the study of the
human microbiome. In particular, ancient dental calculus helps to reconstruct a substantial …

Ancient oral microbiomes support gradual Neolithic dietary shifts towards agriculture

A Quagliariello, A Modi, G Innocenti, V Zaro… - Nature …, 2022 - nature.com
The human microbiome has recently become a valuable source of information about host
life and health. To date little is known about how it may have evolved during key phases …

Environmental DNA of aquatic macrophytes: The potential for reconstructing past and present vegetation and environments

A Revéret, DP Rijal, PD Heintzman… - Freshwater …, 2023 - Wiley Online Library
Environmental DNA is increasingly being used to reconstruct past and present biodiversity
including from freshwater ecosystems. Macrophytes are especially good environmental …

Metagenomic analysis of Mesolithic chewed pitch reveals poor oral health among stone age individuals

E Kırdök, N Kashuba, H Damlien, MA Manninen… - Scientific reports, 2024 - nature.com
Prehistoric chewed pitch has proven to be a useful source of ancient DNA, both from
humans and their microbiomes. Here we present the metagenomic analysis of three pieces …

Spatiotemporal variation in human settlements and their interaction with living environments in Neolithic and Bronze Age China

G Dong, Y Lu, S Zhang, X Huang… - Progress in Physical …, 2022 - journals.sagepub.com
It is evident that the origin, development, and expansion of agriculture and animal
husbandry during the Neolithic and Bronze Age periods across Eurasia facilitated the …

Nepali oral microbiomes reflect a gradient of lifestyles from traditional to industrialized

EP Ryu, Y Gautam, DM Proctor, D Bhandari… - Microbiome, 2024 - Springer
Background Lifestyle plays an important role in shaping the gut microbiome. However, its
contributions to the oral microbiome remain less clear, due to the confounding effects of …

Wild cereal grain consumption among Early Holocene foragers of the Balkans predates the arrival of agriculture

E Cristiani, A Radini, A Zupancich, A Gismondi… - Elife, 2021 - elifesciences.org
Forager focus on wild cereal plants has been documented in the core zone of domestication
in southwestern Asia, while evidence for forager use of wild grass grains remains sporadic …