Machine intelligence for chemical reaction space

P Schwaller, AC Vaucher, R Laplaza… - Wiley …, 2022 - Wiley Online Library
Discovering new reactions, optimizing their performance, and extending the synthetically
accessible chemical space are critical drivers for major technological advances and more …

[HTML][HTML] Predictive chemistry: machine learning for reaction deployment, reaction development, and reaction discovery

Z Tu, T Stuyver, CW Coley - Chemical science, 2023 - pubs.rsc.org
The field of predictive chemistry relates to the development of models able to describe how
molecules interact and react. It encompasses the long-standing task of computer-aided …

The open reaction database

SM Kearnes, MR Maser, M Wleklinski… - Journal of the …, 2021 - ACS Publications
Chemical reaction data in journal articles, patents, and even electronic laboratory notebooks
are currently stored in various formats, often unstructured, which presents a significant …

Machine learning may sometimes simply capture literature popularity trends: a case study of heterocyclic Suzuki–Miyaura coupling

W Beker, R Roszak, A Wołos, NH Angello… - Journal of the …, 2022 - ACS Publications
Applications of machine learning (ML) to synthetic chemistry rely on the assumption that
large numbers of literature-reported examples should enable construction of accurate and …

Unified deep learning model for multitask reaction predictions with explanation

J Lu, Y Zhang - Journal of chemical information and modeling, 2022 - ACS Publications
There is significant interest and importance to develop robust machine learning models to
assist organic chemistry synthesis. Typically, task-specific machine learning models for …

Data sharing in chemistry: lessons learned and a case for mandating structured reaction data

R Mercado, SM Kearnes, CW Coley - Journal of Chemical …, 2023 - ACS Publications
The past decade has seen a number of impressive developments in predictive chemistry
and reaction informatics driven by machine learning applications to computer-aided …

Automated chemical reaction extraction from scientific literature

J Guo, AS Ibanez-Lopez, H Gao, V Quach… - Journal of chemical …, 2021 - ACS Publications
Access to structured chemical reaction data is of key importance for chemists in performing
bench experiments and in modern applications like computer-aided drug design. Existing …

[HTML][HTML] Inferring experimental procedures from text-based representations of chemical reactions

AC Vaucher, P Schwaller, J Geluykens, VH Nair… - Nature …, 2021 - nature.com
The experimental execution of chemical reactions is a context-dependent and time-
consuming process, often solved using the experience collected over multiple decades of …

[HTML][HTML] Predicting reaction conditions from limited data through active transfer learning

E Shim, JA Kammeraad, Z Xu, A Tewari, T Cernak… - Chemical …, 2022 - pubs.rsc.org
Transfer and active learning have the potential to accelerate the development of new
chemical reactions, using prior data and new experiments to inform models that adapt to the …

[HTML][HTML] The challenge of balancing model sensitivity and robustness in predicting yields: a benchmarking study of amide coupling reactions

Z Liu, YS Moroz, O Isayev - Chemical Science, 2023 - pubs.rsc.org
Accurate prediction of reaction yield is the holy grail for computer-assisted synthesis
prediction, but current models have failed to generalize to large literature datasets. To …