3D enhancer-promoter interactions and multi-connected hubs: Organizational principles and functional roles
CM Uyehara, E Apostolou - Cell reports, 2023 - cell.com
The spatiotemporal control of gene expression is dependent on the activity of cis-acting
regulatory sequences, called enhancers, which regulate target genes over variable genomic …
regulatory sequences, called enhancers, which regulate target genes over variable genomic …
Long-range gene regulation in hormone-dependent cancer
The human genome is organized into multiple structural layers, ranging from chromosome
territories to progressively smaller substructures, such as topologically associating domains …
territories to progressively smaller substructures, such as topologically associating domains …
On the role of phase separation in the biogenesis of membraneless compartments
A Musacchio - The EMBO journal, 2022 - embopress.org
Molecular mechanistic biology has ushered us into the world of life's building blocks,
revealing their interactions in macromolecular complexes and inspiring strategies for …
revealing their interactions in macromolecular complexes and inspiring strategies for …
1, 6-hexanediol rapidly immobilizes and condenses chromatin in living human cells
Liquid droplets formed inside the cell by liquid–liquid phase separation maintain membrane-
less condensates/bodies (or compartments). These droplets are important for concentrating …
less condensates/bodies (or compartments). These droplets are important for concentrating …
RNA polymerase II clusters form in line with surface condensation on regulatory chromatin
It is essential for cells to control which genes are transcribed into RNA. In eukaryotes, two
major control points are recruitment of RNA polymerase II (Pol II) into a paused state, and …
major control points are recruitment of RNA polymerase II (Pol II) into a paused state, and …
Therapeutic targeting of FUBP3 phase separation by GATA2-AS1 inhibits malate-aspartate shuttle and neuroblastoma progression via modulating SUZ12 activity
X Wang, Y Guo, G Chen, E Fang, J Wang, Q Li, D Li… - Oncogene, 2023 - nature.com
Malate-aspartate shuttle (MAS) is essential for maintaining glycolysis and energy
metabolism in tumors, while its regulatory mechanisms in neuroblastoma (NB), the …
metabolism in tumors, while its regulatory mechanisms in neuroblastoma (NB), the …
Time-dependent effect of 1, 6-hexanediol on biomolecular condensates and 3D chromatin organization
Background Biomolecular condensates have been implicated in multiple cellular processes.
However, the global role played by condensates in 3D chromatin organization remains …
However, the global role played by condensates in 3D chromatin organization remains …
[HTML][HTML] Sufu limits sepsis-induced lung inflammation via regulating phase separation of TRAF6
Y Li, J Peng, Y Xia, C Pan, Y Li, W Gu, J Wang… - Theranostics, 2023 - ncbi.nlm.nih.gov
Rationale: Sepsis is a potentially life-threatening condition caused by the body's response to
a severe infection. Although the identification of multiple pathways involved in inflammation …
a severe infection. Although the identification of multiple pathways involved in inflammation …
Chromatin conformation in development and disease
I Boltsis, F Grosveld, G Giraud… - Frontiers in Cell and …, 2021 - frontiersin.org
Chromatin domains and loops are important elements of chromatin structure and dynamics,
but much remains to be learned about their exact biological role and nature. Topological …
but much remains to be learned about their exact biological role and nature. Topological …
Spermine enhances antiviral and anticancer responses by stabilizing DNA binding with the DNA sensor cGAS
L Wang, S Li, K Wang, N Wang, Q Liu, Z Sun, L Wang… - Immunity, 2023 - cell.com
Self-nonself discrimination is vital for the immune system to mount responses against
pathogens while maintaining tolerance toward the host and innocuous commensals during …
pathogens while maintaining tolerance toward the host and innocuous commensals during …