As interest has increased in the interaction between low-temperature plasmas and living
cells or organic materials, the role of modelling and simulation of atmospheric pressure …

The inherent complexity of biomedical systems is well recognized; they are multi-scale, multi-
science systems, bridging a wide range of temporal and spatial scales. This article reviews …

Computer simulations have become an invaluable tool to study the sometimes
counterintuitive temporal dynamics of (bio-) chemical systems. In particular, stochastic …

Large amounts of lipidomics data are rapidly becoming available. However, there is a lack of
tools capable of taking the full advantage of the wealth of new information. Lipid …

Autophagy plays a crucial role in maintaining cellular homeostasis through the degradation
of unwanted materials like damaged mitochondria and misfolded proteins. However, the …

This report looks at the published literary sources on methods and approaches, which are
based on fractional calculus (that is, calculus of integrals and derivatives of any arbitrary real …

This essay provides an introduction to the terminology, concepts, methods, and challenges
of image‐based modeling in biology. Image‐based modeling and simulation aims at using …

We present a new simulation algorithm that allows for dynamic switching between a
mesoscopic and a microscopic modeling framework for stochastic reaction-diffusion kinetics …

A connection between lipid rafts and Alzheimer's disease has been studied during the last
decades. Mathematical modeling approaches have recently been used to correlate the …

(2006)] was developed to simulate delayed processes in cell biology in the presence of
intrinsic noise, that is, when there are small-to-moderate numbers of certain key molecules …