Long non-coding RNA-dependent transcriptional regulation in neuronal development and disease

BS Clark, S Blackshaw - Frontiers in genetics, 2014 - frontiersin.org
Comprehensive analysis of the mammalian transcriptome has revealed that long non-
coding RNAs (lncRNAs) may make up a large fraction of cellular transcripts. Recent years …

A central role for long non-coding RNA in cancer

SA Mitra, AP Mitra, TJ Triche - Frontiers in genetics, 2012 - frontiersin.org
Long non-coding RNAs (ncRNAs) have been shown to regulate important biological
processes that support normal cellular functions. Aberrant regulation of these essential …

Genes, mutations, and human inherited disease at the dawn of the age of personalized genomics

DN Cooper, JM Chen, EV Ball, K Howells… - Human …, 2010 - Wiley Online Library
The number of reported germline mutations in human nuclear genes, either underlying or
associated with inherited disease, has now exceeded 100,000 in more than 3,700 different …

[HTML][HTML] Exploring long non-coding RNAs through sequencing

SR Atkinson, S Marguerat, J Bähler - Seminars in cell & developmental …, 2012 - Elsevier
Long non-coding RNAs (lncRNAs) are emerging as an important class of regulatory
transcripts that are implicated in a variety of biological functions. RNA-sequencing, along …

Long non-coding RNA in stem cell pluripotency and lineage commitment: functions and evolutionary conservation

A Fico, A Fiorenzano, E Pascale, EJ Patriarca… - Cellular and molecular …, 2019 - Springer
LncRNAs have recently emerged as new and fundamental transcriptional and post-
transcriptional regulators acting at multiple levels of gene expression. Indeed, lncRNAs …

Human genetics and genomics a decade after the release of the draft sequence of the human genome

N Naidoo, Y Pawitan, R Soong, DN Cooper, CS Ku - Human genomics, 2011 - Springer
Substantial progress has been made in human genetics and genomics research over the
past ten years since the publication of the draft sequence of the human genome in 2001 …

Disrupted auto-regulation of the spliceosomal gene SNRPB causes cerebro–costo–mandibular syndrome

DC Lynch, T Revil, J Schwartzentruber, EJ Bhoj… - Nature …, 2014 - nature.com
Elucidating the function of highly conserved regulatory sequences is a significant challenge
in genomics today. Certain intragenic highly conserved elements have been associated with …

The most deeply conserved noncoding sequences in plants serve similar functions to those in vertebrates despite large differences in evolutionary rates

D Burgess, M Freeling - The Plant Cell, 2014 - academic.oup.com
In vertebrates, conserved noncoding elements (CNEs) are functionally constrained
sequences that can show striking conservation over> 400 million years of evolutionary …

[HTML][HTML] Transcribed ultraconserved noncoding RNAs (T-UCR) are involved in Barrett's esophagus carcinogenesis

M Fassan, L Dall'Olmo, M Galasso, C Braconi, M Pizzi… - Oncotarget, 2014 - ncbi.nlm.nih.gov
Barrett's esophagus (BE) involves a metaplastic replacement of native esophageal
squamous epithelium (Sq) by columnar-intestinalized mucosa, and it is the main risk factor …

A large scale expression study associates uc. 283-plus lncRNA with pluripotent stem cells and human glioma

M Galasso, P Dama, M Previati, S Sandhu, J Palatini… - Genome medicine, 2014 - Springer
Background There are 481 ultra-conserved regions (UCRs) longer than 200 bases in the
genomes of human, mouse and rat. These DNA sequences are absolutely conserved and …