iMEC: Online marker efficiency calculator
A Amiryousefi, J Hyvönen… - Applications in plant …, 2018 - Wiley Online Library
Premise of the Study To accurately design plant genetic studies, the information content of
utilized markers and primers must be calculated. Plant genotyping studies should take into …
utilized markers and primers must be calculated. Plant genotyping studies should take into …
Genetic and genomic monitoring with minimally invasive sampling methods
The decreasing cost and increasing scope and power of emerging genomic technologies
are reshaping the field of molecular ecology. However, many modern genomic approaches …
are reshaping the field of molecular ecology. However, many modern genomic approaches …
High‐throughput microsatellite genotyping in ecology: Improved accuracy, efficiency, standardization and success with low‐quantity and degraded DNA
M De Barba, C Miquel, S Lobréaux… - Molecular Ecology …, 2017 - Wiley Online Library
Microsatellite markers have played a major role in ecological, evolutionary and conservation
research during the past 20 years. However, technical constrains related to the use of …
research during the past 20 years. However, technical constrains related to the use of …
The birth and death of olfactory receptor gene families in mammalian niche adaptation
The olfactory receptor (OR) gene families, which govern mammalian olfaction, have
undergone extensive expansion and contraction through duplication and pseudogenization …
undergone extensive expansion and contraction through duplication and pseudogenization …
Application of microsatellite genotyping by sequencing (SSR-GBS) to measure genetic diversity of the East African Oreochromis niloticus
PD Tibihika, M Curto, E Dornstauder-Schrammel… - Conservation …, 2019 - Springer
Microsatellites play an important role when investigating population and ecological genetics,
although high effort in development and genotyping constitute a technical constraint and …
although high effort in development and genotyping constitute a technical constraint and …
SSR‐seq: Genotyping of microsatellites using next‐generation sequencing reveals higher level of polymorphism as compared to traditional fragment size scoring
P Šarhanová, S Pfanzelt, R Brandt… - Ecology and …, 2018 - Wiley Online Library
Microsatellites (or simple sequence repeats, SSR) are widely used markers in population
genetics. Traditionally, genotyping was and still is carried out through recording fragment …
genetics. Traditionally, genotyping was and still is carried out through recording fragment …
Molecular genetic diversity and differentiation of Nile tilapia (Oreochromis niloticus, L. 1758) in East African natural and stocked populations
PD Tibihika, M Curto, E Alemayehu… - BMC Evolutionary …, 2020 - Springer
Background The need for enhancing the productivity of fisheries in Africa triggered the
introduction of non-native fish, causing dramatic changes to local species. In East Africa, the …
introduction of non-native fish, causing dramatic changes to local species. In East Africa, the …
Unraveling hierarchical genetic structure in a marine metapopulation: A comparison of three high‐throughput genotyping approaches
CC D'Aloia, JA Andrés, SM Bogdanowicz… - Molecular …, 2020 - Wiley Online Library
Marine metapopulations often exhibit subtle population structure that can be difficult to
detect. Given recent advances in high‐throughput sequencing, an emerging question is …
detect. Given recent advances in high‐throughput sequencing, an emerging question is …
Rapid and easy construction of a simplified amplicon sequencing (simplified AmpSeq) library for marker-assisted selection
S Nishio, S Moriya, M Kunihisa, Y Takeuchi, A Imai… - Scientific Reports, 2023 - nature.com
Marker-assisted selection (MAS) is fundamental for plant breeding programs, as it can
identify desirable seedlings at a young stage and reduce the cost, time and space needed …
identify desirable seedlings at a young stage and reduce the cost, time and space needed …
Application of a SSR‐GBS marker system on investigation of European Hedgehog species and their hybrid zone dynamics
M Curto, S Winter, A Seiter, L Schmid… - Ecology and …, 2019 - Wiley Online Library
By applying second‐generation sequencing technologies to microsatellite genotyping,
sequence information is produced which can result in high‐resolution population genetics …
sequence information is produced which can result in high‐resolution population genetics …