[HTML][HTML] Biological activities and biomedical potential of sea cucumber (Stichopus japonicus): a review

GW Oh, SC Ko, DH Lee, SJ Heo, WK Jung - Fisheries and Aquatic …, 2017 - Springer
Members of the phylum Echinodermata, commonly known as echinoderms, are exclusively
marine invertebrates. Among the Echinodermata, sea cucumber belongs to the family …

A review on sea cucumber (Bengali: Somuddro Sosha) as a bioindicator of heavy metal contamination and toxicity

MS Bhuyan, L Bat, V Senapathi, P Kulandaisamy… - Marine Pollution …, 2024 - Elsevier
This review paper exhibits the underexplored realm of heavy metal contamination and
associated risks in sea cucumbers (SCs), which hold significant importance in traditional …

[HTML][HTML] Biosynthesis of saponin defensive compounds in sea cucumbers

R Thimmappa, S Wang, M Zheng, RC Misra… - Nature chemical …, 2022 - nature.com
Soft-bodied slow-moving sea creatures such as sea stars and sea cucumbers lack an
adaptive immune system and have instead evolved the ability to make specialized protective …

[HTML][HTML] Sea cucumber genome provides insights into saponin biosynthesis and aestivation regulation

Y Li, R Wang, X Xun, J Wang, L Bao, R Thimmappa… - Cell Discovery, 2018 - nature.com
Echinoderms exhibit several fascinating evolutionary innovations that are rarely seen in the
animal kingdom, but how these animals attained such features is not well understood. Here …

[HTML][HTML] Assessing De Novo transcriptome assembly metrics for consistency and utility

ST O'Neil, SJ Emrich - BMC genomics, 2013 - Springer
Background Transcriptome sequencing and assembly represent a great resource for the
study of non-model species, and many metrics have been used to evaluate and compare …

The possible routes of microplastics uptake in sea cucumber Holothuria cinerascens (Brandt, 1835)

OA Iwalaye, GK Moodley… - Environmental Pollution, 2020 - Elsevier
Investigating the routes of microplastic uptake in sea cucumber is crucial in this plastics
pollution age considering their non-selective feeding process, nutritional, biomedical and …

Probabilistic error correction for RNA sequencing

HS Le, MH Schulz, BM McCauley… - Nucleic acids …, 2013 - academic.oup.com
Abstract Sequencing of RNAs (RNA-Seq) has revolutionized the field of transcriptomics, but
the reads obtained often contain errors. Read error correction can have a large impact on …

[HTML][HTML] RNA-Seq Reveals Dynamic Changes of Gene Expression in Key Stages of Intestine Regeneration in the Sea Cucumber Apostichopus japonicas

L Sun, H Yang, M Chen, D Ma, C Lin - PloS one, 2013 - journals.plos.org
Background Sea cucumbers (Holothuroidea; Echinodermata) have the capacity to
regenerate lost tissues and organs. Although the histological and cytological aspects of …

[HTML][HTML] A de novo transcriptome of the noble scallop, Chlamys nobilis, focusing on mining transcripts for carotenoid-based coloration

H Liu, H Zheng, H Zhang, L Deng, W Liu, S Wang… - BMC genomics, 2015 - Springer
Abstract Background The noble scallop Chlamys nobilis Reeve displays polymorphism in
shell and muscle colors. Previous research showed that the orange scallops with orange …

Transcriptome sequencing of sea cucumber (Apostichopus japonicus) and the identification of gene‐associated markers

ZC Zhou, Y Dong, HJ Sun, AF Yang… - Molecular ecology …, 2014 - Wiley Online Library
Sea cucumber (Apostichopus japonicus) is an ecologically and economically important
species in East and South‐East Asia. This project aimed to identify large numbers of gene …