Recent advances in oomycete genomics
J McGowan, DA Fitzpatrick - Advances in genetics, 2020 - Elsevier
The oomycetes are a class of ubiquitous, filamentous microorganisms that include some of
the biggest threats to global food security and natural ecosystems. Within the oomycete …
the biggest threats to global food security and natural ecosystems. Within the oomycete …
Large sub-clonal variation in Phytophthora infestans from recent severe late blight epidemics in India
The population structure of the Phytophthora infestans populations that caused the recent
2013–14 late blight epidemic in eastern India (EI) and northeastern India (NEI) was …
2013–14 late blight epidemic in eastern India (EI) and northeastern India (NEI) was …
Cleavage of a pathogen apoplastic protein by plant subtilases activates host immunity
S Wang, R Xing, Y Wang, H Shu, S Fu, J Huang… - The New …, 2021 - JSTOR
• The plant apoplast is a harsh environment in which hydrolytic enzymes, especially
proteases, accumulate during pathogen infection. However, the defense functions of most …
proteases, accumulate during pathogen infection. However, the defense functions of most …
Niche-specific metabolic adaptation in biotrophic and necrotrophic oomycetes is manifested in differential use of nutrients, variation in gene content, and enzyme …
AMV Ah-Fong, MS Kagda, M Abrahamian… - PLoS …, 2019 - journals.plos.org
The use of host nutrients to support pathogen growth is central to disease. We addressed
the relationship between metabolism and trophic behavior by comparing metabolic gene …
the relationship between metabolism and trophic behavior by comparing metabolic gene …
Conserved subgroups of the plant-specific RWP-RK transcription factor family are present in oomycete pathogens
M Yin, Z Zhang, M Xuan, H Feng, W Ye… - Frontiers in …, 2020 - frontiersin.org
Nitrogen is a major constituent of proteins, chlorophyll, nucleotides, and hormones and has
profound effects on plant growth and productivity. RWP-RK family transcription factors (TFs) …
profound effects on plant growth and productivity. RWP-RK family transcription factors (TFs) …
Comparative analysis of oomycete genome evolution using the oomycete gene order browser (OGOB)
J McGowan, KP Byrne… - Genome biology and …, 2019 - academic.oup.com
The oomycetes are a class of microscopic, filamentous eukaryotes within the stramenopiles–
alveolates–rhizaria eukaryotic supergroup. They include some of the most destructive …
alveolates–rhizaria eukaryotic supergroup. They include some of the most destructive …
Draft Genome Sequence for the Tree Pathogen Phytophthora plurivora
Species from the genus Phytophthora are well represented among organisms causing
serious diseases on trees. Phytophthora plurivora has been implicated in long-term decline …
serious diseases on trees. Phytophthora plurivora has been implicated in long-term decline …
Characterization of phenotypic variation and genome aberrations observed among Phytophthora ramorum isolates from diverse hosts
M Elliott, J Yuzon, S Tripathy, M Bui, GA Chastagner… - BMC genomics, 2018 - Springer
Background Accumulating evidence suggests that genome plasticity allows filamentous
plant pathogens to adapt to changing environments. Recently, the generalist plant pathogen …
plant pathogens to adapt to changing environments. Recently, the generalist plant pathogen …
Oomycete Gene Table: an online database for comparative genomic analyses of the oomycete microorganisms
T Rujirawat, P Patumcharoenpol, W Kittichotirat… - Database, 2019 - academic.oup.com
Oomycetes form a unique group of the fungal-like, aquatic, eukaryotic microorganisms.
Lifestyle and pathogenicity of the oomycetes are diverse. Many pathogenic oomycetes affect …
Lifestyle and pathogenicity of the oomycetes are diverse. Many pathogenic oomycetes affect …
Haplotype-Phased Genome Assembly of Virulent Phytophthora ramorum Isolate ND886 Facilitated by Long-Read Sequencing Reveals Effector Polymorphisms and …
Phytophthora ramorum is a destructive pathogen that causes sudden oak death disease.
The genome sequence of P. ramorum isolate Pr102 was previously produced, using Sanger …
The genome sequence of P. ramorum isolate Pr102 was previously produced, using Sanger …