Computational framework to support integration of biomolecular and clinical data within a translational approach

NSB Miyoshi, DG Pinheiro, WA Silva, JC Felipe - BMC bioinformatics, 2013 - Springer
Background The use of the knowledge produced by sciences to promote human health is
the main goal of translational medicine. To make it feasible we need computational methods …

[HTML][HTML] k-Neighborhood decentralization: a comprehensive solution to index the UMLS for large scale knowledge discovery

Y Xiang, K Lu, SL James, TB Borlawsky… - Journal of Biomedical …, 2012 - Elsevier
The Unified Medical Language System (UMLS) is the largest thesaurus in the biomedical
informatics domain. Previous works have shown that knowledge constructs comprised of …

[HTML][HTML] Supporting the design of translational clinical studies through the generation and verification of conceptual knowledge-anchored hypotheses

PRO Payne, TB Borlawsky, A Kwok… - AMIA Annual …, 2008 - ncbi.nlm.nih.gov
The ability to generate hypotheses based upon the contents of large-scale, heterogeneous
data sets is critical to the design of translational clinical studies. In previous reports, we have …

Multi-dimensional discovery of biomarker and phenotype complexes

PRO Payne, K Huang, K Keen-Circle, A Kundu… - BMC …, 2010 - Springer
Background Given the rapid growth of translational research and personalized healthcare
paradigms, the ability to relate and reason upon networks of bio-molecular and phenotypic …

Scientist and data architect collaborate to curate and archive an inner ear electrophysiology data collection

B Farrell, J Bengtson - PLoS One, 2019 - journals.plos.org
In the past scientists reported summaries of their findings; they did not provide their original
data collections. Many stakeholders (eg, funding agencies) are now requesting that such …

[HTML][HTML] IQ: Development and evaluation of an ontology-anchored integrative query tool

TB Borlawsky, O Lele, PRO Payne - Journal of biomedical informatics, 2011 - Elsevier
Investigators in the translational research and systems medicine domains require highly
usable, efficient and integrative tools and methods that allow for the navigation of and …

[HTML][HTML] Conceptual dissonance: evaluating the efficacy of natural language processing techniques for validating translational knowledge constructs

PRO Payne, A Kwok, R Dhaval… - Summit on Translational …, 2009 - ncbi.nlm.nih.gov
The conduct of large-scale translational studies presents significant challenges related to
the storage, management and analysis of integrative data sets. Ideally, the application of …

Pediatric diabetes registries: when baby steps are not enough

C Malone, GD Kennedy - 2011 - journals.sagepub.com
Effective diabetes research relies on pattern recognition. Although information technology
(IT) has been used to aid researchers in recognizing patterns, there are still barriers to …

In silico hypothesis discovery

PRO Payne - Translational Informatics: Realizing the Promise of …, 2014 - Springer
As has been introduced in the preceding chapters, the biomedical and life sciences domains
have experienced explosive growth in terms of the volume and complexity of data sets …

A polar modulated CMOS class-E amplifier with a class-F driver stage

WA Tsou, WS Wuen, KA Wen - 2009 Third International …, 2009 - ieeexplore.ieee.org
This work presents a fully integrated polar modulated CMOS class-E amplifier in a 0.18¿ m
CMOS process. The amplifier using the device-stacking topology is implemented with a self …