The impact of structural genomics: the first quindecennial
M Grabowski, E Niedzialkowska… - Journal of structural and …, 2016 - Springer
The period 2000–2015 brought the advent of high-throughput approaches to protein
structure determination. With the overall funding on the order of $2 billion (in 2010 dollars) …
structure determination. With the overall funding on the order of $2 billion (in 2010 dollars) …
ModBase, a database of annotated comparative protein structure models and associated resources
U Pieper, BM Webb, GQ Dong… - Nucleic acids …, 2014 - academic.oup.com
Abstract ModBase (http://salilab. org/modbase) is a database of annotated comparative
protein structure models. The models are calculated by ModPipe, an automated modeling …
protein structure models. The models are calculated by ModPipe, an automated modeling …
DNASU plasmid and PSI: Biology-Materials repositories: resources to accelerate biological research
The mission of the DNASU Plasmid Repository is to accelerate research by providing high-
quality, annotated plasmid samples and online plasmid resources to the research …
quality, annotated plasmid samples and online plasmid resources to the research …
[HTML][HTML] Structural genomics and the protein data bank
K Michalska, A Joachimiak - Journal of Biological Chemistry, 2021 - ASBMB
The field of Structural Genomics arose over the last 3 decades to address a large and
rapidly growing divergence between microbial genomic, functional, and structural data …
rapidly growing divergence between microbial genomic, functional, and structural data …
Revealing the hidden functional diversity of an enzyme family
K Bastard, AAT Smith, C Vergne-Vaxelaire… - Nature chemical …, 2014 - nature.com
Millions of protein database entries are not assigned reliable functions, preventing the full
understanding of chemical diversity in living organisms. Here, we describe an integrated …
understanding of chemical diversity in living organisms. Here, we describe an integrated …
BioMagResBank (BMRB) as a resource for structural biology
PR Romero, N Kobayashi, JR Wedell… - … : Methods and Protocols, 2020 - Springer
Abstract The Biological Magnetic Resonance Data Bank (BioMagResBank or BMRB),
founded in 1988, serves as the archive for data generated by nuclear magnetic resonance …
founded in 1988, serves as the archive for data generated by nuclear magnetic resonance …
Trends in structural coverage of the protein universe and the impact of the Protein Structure Initiative
K Khafizov, C Madrid-Aliste… - Proceedings of the …, 2014 - National Acad Sciences
The exponential growth of protein sequence data provides an ever-expanding body of
unannotated and misannotated proteins. The National Institutes of Health-supported Protein …
unannotated and misannotated proteins. The National Institutes of Health-supported Protein …
Quantitative characterization of bovine serum albumin thin-films using terahertz spectroscopy and machine learning methods
The development of new spectral analysis methods in bio thin-film detection has generated
intense interest in terahertz (THz) spectroscopy and its application in a wide range of fields …
intense interest in terahertz (THz) spectroscopy and its application in a wide range of fields …
Annotation of proteins of unknown function: initial enzyme results
T McKay, K Hart, A Horn, H Kessler, G Dodge… - Journal of structural and …, 2015 - Springer
Working with a combination of ProMOL (a plugin for PyMOL that searches a library of
enzymatic motifs for local structural homologs), BLAST and Pfam (servers that identify global …
enzymatic motifs for local structural homologs), BLAST and Pfam (servers that identify global …
The EBI enzyme portal
R Alcantara, J Onwubiko, H Cao, P Matos… - Nucleic acids …, 2013 - academic.oup.com
The availability of comprehensive information about enzymes plays an important role in
answering questions relevant to interdisciplinary fields such as biochemistry, enzymology …
answering questions relevant to interdisciplinary fields such as biochemistry, enzymology …