Genomic surveillance for antimicrobial resistance—a One Health perspective
Antimicrobial resistance (AMR)—the ability of microorganisms to adapt and survive under
diverse chemical selection pressures—is influenced by complex interactions between …
diverse chemical selection pressures—is influenced by complex interactions between …
Connecting structure to function with the recovery of over 1000 high-quality metagenome-assembled genomes from activated sludge using long-read sequencing
Microorganisms play crucial roles in water recycling, pollution removal and resource
recovery in the wastewater industry. The structure of these microbial communities is …
recovery in the wastewater industry. The structure of these microbial communities is …
Prospects for multi-omics in the microbial ecology of water engineering
Advances in high-throughput sequencing technologies and bioinformatics approaches over
almost the last three decades have substantially increased our ability to explore …
almost the last three decades have substantially increased our ability to explore …
Carbon uptake bioenergetics of PAOs and GAOs in full-scale enhanced biological phosphorus removal systems
This work analyzed, for the first time, the bioenergetics of PAOs and GAOs in full-scale
wastewater treatment plants (WWTPs) for the uptake of different carbon sources. Fifteen …
wastewater treatment plants (WWTPs) for the uptake of different carbon sources. Fifteen …
Global warming readiness: feasibility of enhanced biological phosphorus removal at 35° C
Recent research has shown enhanced biological phosphorus removal (EBPR) from
municipal wastewater at warmer temperatures around 30° C to be achievable in both …
municipal wastewater at warmer temperatures around 30° C to be achievable in both …
Analyzing modern biomolecules: the revolution of nucleic-acid sequencing–Review
G Dorado, S Gálvez, TE Rosales, VF Vásquez… - Biomolecules, 2021 - mdpi.com
Recent developments have revolutionized the study of biomolecules. Among them are
molecular markers, amplification and sequencing of nucleic acids. The latter is classified into …
molecular markers, amplification and sequencing of nucleic acids. The latter is classified into …
Strategies and tools in illumina and nanopore‐integrated metagenomic analysis of microbiome data
Metagenomic strategy serves as the foundation for the ecological exploration of novel
bioresources (eg, industrial enzymes and bioactive molecules) and biohazards (eg …
bioresources (eg, industrial enzymes and bioactive molecules) and biohazards (eg …
MinION Nanopore sequencing accelerates progress towards ubiquitous genetics in water research
In 2014, Oxford Nanopore Technologies (ONT) introduced an affordable and portable
sequencer called MinION. We reviewed emerging applications in water research and …
sequencer called MinION. We reviewed emerging applications in water research and …
The long and short of it: benchmarking viromics using Illumina, Nanopore and PacBio sequencing technologies
Viral metagenomics has fuelled a rapid change in our understanding of global viral diversity
and ecology. Long-read sequencing and hybrid assembly approaches that combine long …
and ecology. Long-read sequencing and hybrid assembly approaches that combine long …
Recent advances in understanding the ecology of the filamentous bacteria responsible for activated sludge bulking
T Nittami, S Batinovic - Letters in applied microbiology, 2022 - academic.oup.com
Activated sludge bulking caused by filamentous bacteria is still a problem in wastewater
treatment plants around the world. Bulking is a microbiological problem, and so its solution …
treatment plants around the world. Bulking is a microbiological problem, and so its solution …