Making the most of 'omics' for crop breeding

P Langridge, D Fleury - Trends in biotechnology, 2011 - cell.com
Adoption of new breeding technologies is likely to underpin future gains in crop productivity.
The rapid advances in 'omics' technologies provide an opportunity to generate new datasets …

Cotton germplasm improvement and progress in Pakistan

A Razzaq, MM Zafar, A Ali, A Hafeez, W Batool… - Journal of Cotton …, 2021 - Springer
Cotton (Gossypium spp.) contributes significantly to the economy of cotton-producing
countries. Pakistan is the fourth-largest producer of cotton after China, the USA and India …

Development of a 63K SNP Array for Cotton and High-Density Mapping of Intraspecific and Interspecific Populations of Gossypium spp.

AM Hulse-Kemp, J Lemm, J Plieske… - G3: Genes …, 2015 - academic.oup.com
High-throughput genotyping arrays provide a standardized resource for plant breeding
communities that are useful for a breadth of applications including high-density genetic …

Development and mapping of SNP assays in allotetraploid cotton

RL Byers, DB Harker, SM Yourstone… - Theoretical and Applied …, 2012 - Springer
A narrow germplasm base and a complex allotetraploid genome have made the discovery of
single nucleotide polymorphism (SNP) markers difficult in cotton (Gossypium hirsutum). To …

De novo assembly of the pepper transcriptome (Capsicum annuum): a benchmark for in silico discovery of SNPs, SSRs and candidate genes

H Ashrafi, T Hill, K Stoffel, A Kozik, JQ Yao… - BMC genomics, 2012 - Springer
Background Molecular breeding of pepper (Capsicum spp.) can be accelerated by
developing DNA markers associated with transcriptomes in breeding germplasm. Before the …

Genome-wide SNP linkage mapping and QTL analysis for fiber quality and yield traits in the upland cotton recombinant inbred lines population

C Li, Y Dong, T Zhao, L Li, C Li, E Yu, L Mei… - Frontiers in plant …, 2016 - frontiersin.org
It is of significance to discover genes related to fiber quality and yield traits and tightly linked
markers for marker-assisted selection (MAS) in cotton breeding. In this study, 188 F8 …

A high-density simple sequence repeat and single nucleotide polymorphism genetic map of the tetraploid cotton genome

JZ Yu, RJ Kohel, DD Fang, J Cho… - G3: Genes …, 2012 - academic.oup.com
Genetic linkage maps play fundamental roles in understanding genome structure,
explaining genome formation events during evolution, and discovering the genetic bases of …

Evolution and diversity of the cotton genome

G Hu, CE Grover, J Jareczek, D Yuan, Y Dong… - Cotton precision …, 2021 - Springer
We present an overview of Gossypium genome evolution and the implications of this
understanding for targeted breeding objectives. The cotton genus (Gossypium) contains …

Linkage map construction and quantitative trait locus analysis of agronomic and fiber quality traits in cotton

MA Gore, DD Fang, JA Poland, J Zhang… - The plant …, 2014 - Wiley Online Library
The superior fiber properties of Gossypium barbadense L. serve as a source of novel
variation for improving fiber quality in Upland cotton (G. hirsutum L.), but introgression from …

陆地棉核心种质表型性状遗传多样性分析及综合评价

代攀虹, 孙君灵, 何守朴, 王立如, 贾银华, 潘兆娥… - 中国农业 …, 2016 - chinaagrisci.com
[Objective] The objective of this study is to analyze the genetic diversity and the law of
genetic variation of phenotypic traits and explore the comprehensive evaluation techniques …