The protein folding problem

KA Dill, SB Ozkan, MS Shell, TR Weikl - Annu. Rev. Biophys., 2008 - annualreviews.org
The “protein folding problem” consists of three closely related puzzles:(a) What is the folding
code?(b) What is the folding mechanism?(c) Can we predict the native structure of a protein …

Intrinsically disordered proteins from A to Z

VN Uversky - The international journal of biochemistry & cell biology, 2011 - Elsevier
The ideas that proteins might possess specific functions without being uniquely folded into
rigid 3D-structures and that these floppy polypeptides might constitute a noticeable part of …

[HTML][HTML] De novo design of modular and tunable protein biosensors

A Quijano-Rubio, HW Yeh, J Park, H Lee, RA Langan… - Nature, 2021 - nature.com
Naturally occurring protein switches have been repurposed for the development of
biosensors and reporters for cellular and clinical applications. However, the number of such …

Twilight zone of protein sequence alignments

B Rost - Protein engineering, 1999 - academic.oup.com
Sequence alignments unambiguously distinguish between protein pairs of similar and non-
similar structure when the pairwise sequence identity is high (> 40% for long alignments) …

Instability, unfolding and aggregation of human lysozyme variants underlying amyloid fibrillogenesis

DR Booth, M Sunde, V Bellotti, CV Robinson… - Nature, 1997 - nature.com
Tissue deposition of soluble proteins as amyloid fibrils underlies a range of fatal diseases.
The two naturally occurring human lysozyme variants are both amyloidogenic, and are …

Responsive gels formed by the spontaneous self-assembly of peptides into polymeric β-sheet tapes

A Aggeli, M Bell, N Boden, JN Keen, PF Knowles… - Nature, 1997 - nature.com
Molecular self-assembly is becoming an increasingly popular route to new supramolecular
structures and molecular materials1–7. The inspiration for such structures is commonly …

Potential application of DBD Plasma Technique for modifying structural and physicochemical properties of Soy Protein Isolate

H Sharafodin, N Soltanizadeh - Food Hydrocolloids, 2022 - Elsevier
The present study was designed and implemented to modify soy protein isolate (SPI) using
dielectric barrier discharge (DBD) plasma and investigate the effects of this treatment on the …

[HTML][HTML] Flexible nets: disorder and induced fit in the associations of p53 and 14-3-3 with their partners

CJ Oldfield, J Meng, JY Yang, MQ Yang, VN Uversky… - BMC genomics, 2008 - Springer
Background Proteins are involved in many interactions with other proteins leading to
networks that regulate and control a wide variety of physiological processes. Some of these …

Emerging biological materials through molecular self-assembly

S Zhang - Biotechnology advances, 2002 - Elsevier
Understanding of new materials at the molecular level has become increasingly critical for a
new generation of nanomaterials for nanotechnology, namely, the design, synthesis and …

[HTML][HTML] Finding nuclear localization signals

M Cokol, R Nair, B Rost - EMBO reports, 2000 - embopress.org
A variety of nuclear localization signals (NLSs) are experimentally known although only one
motif was available for database searches through PROSITE. We initially collected a set of …