Fluorescence quenching by photoinduced electron transfer: a reporter for conformational dynamics of macromolecules

S Doose, H Neuweiler, M Sauer - ChemPhysChem, 2009 - Wiley Online Library
Structural changes on a broad range of length and time scales are closely connected to
biochemical function. The high relevance of conformational dynamics to macromolecular …

Conformational changes of non-B DNA

J Choi, T Majima - Chemical Society Reviews, 2011 - pubs.rsc.org
In contrast to B-DNA that has a right-handed double helical structure with Watson–Crick
base pairing under the ordinary physiological conditions, repetitive DNA sequences under …

Aptamer-based electrochemical sensors with aptamer− complementary DNA oligonucleotides as probe

Y Lu, X Li, L Zhang, P Yu, L Su, L Mao - Analytical Chemistry, 2008 - ACS Publications
This study describes a facile and general strategy for the development of aptamer-based
electrochemical sensors with a high specificity toward the targets and a ready regeneration …

Non-Arrhenius kinetics for the loop closure of a DNA hairpin

MI Wallace, L Ying… - Proceedings of the …, 2001 - National Acad Sciences
Intramolecular chain diffusion is an elementary process in the conformational fluctuations of
the DNA hairpin-loop. We have studied the temperature and viscosity dependence of a …

Recent advances in fluorescence correlation spectroscopy

NL Thompson, AM Lieto, NW Allen - Current opinion in structural biology, 2002 - Elsevier
Fluorescence correlation spectroscopy is a method in which fluctuations in the fluorescence
arising from a very small sample volume are correlated to obtain information about the …

Measuring conformational dynamics: a new FCS-FRET approach

T Torres, M Levitus - The Journal of Physical Chemistry B, 2007 - ACS Publications
Fluorescence correlation spectroscopy (FCS) has recently emerged as a powerful technique
to study conformational dynamics of biomolecules, but often its applicability is limited by the …

Investigating the binding mechanism of temporin Rb with human serum albumin, holo transferrin, and hemoglobin using spectroscopic and molecular dynamics …

N Shakibapour, A Asoodeh, MR Saberi… - Journal of Molecular …, 2023 - Elsevier
The interaction of human serum albumin (HSA), human holo transferrin (HTF), and
hemoglobin (Hb) with temporin Rb (TRb) were investigated using several spectroscopic and …

[图书][B] Handbook of single molecule fluorescence spectroscopy

C Gell, D Brockwell, A Smith - 2006 - books.google.com
Analytical measurements at the single molecule level under ambient conditions have
become almost routine in the past few years. The application of this technology to …

Identifying molecular dynamics in single-molecule FRET experiments with burst variance analysis

JP Torella, SJ Holden, Y Santoso, J Hohlbein… - Biophysical journal, 2011 - cell.com
Histograms of single-molecule Förster resonance energy transfer (FRET) efficiency are often
used to study the structures of biomolecules and relate these structures to function. Methods …

Configurational diffusion down a folding funnel describes the dynamics of DNA hairpins

A Ansari, SV Kuznetsov, Y Shen - Proceedings of the …, 2001 - National Acad Sciences
Elucidating the mechanism of folding of polynucleotides depends on accurate estimates of
free energy surfaces and a quantitative description of the kinetics of structure formation …