Best practices in metabarcoding of fungi: from experimental design to results
The development of high‐throughput sequencing (HTS) technologies has greatly improved
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
our capacity to identify fungi and unveil their ecological roles across a variety of ecosystems …
Mycobiome diversity: high-throughput sequencing and identification of fungi
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …
High-throughput sequencing view on the magnitude of global fungal diversity
High-throughput DNA sequencing has dramatically transformed several areas of biodiversity
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
research including mycology. Despite limitations, high-throughput sequencing is nowadays …
GlobalAMFungi: a global database of arbuscular mycorrhizal fungal occurrences from high‐throughput sequencing metabarcoding studies
T Větrovský, Z Kolaříková, C Lepinay… - New …, 2023 - Wiley Online Library
Arbuscular mycorrhizal (AM) fungi are crucial mutualistic symbionts of the majority of plant
species, with essential roles in plant nutrient uptake and stress mitigation. The importance of …
species, with essential roles in plant nutrient uptake and stress mitigation. The importance of …
A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses
A Hakimzadeh, A Abdala Asbun… - Molecular Ecology …, 2024 - Wiley Online Library
Environmental DNA (eDNA) metabarcoding has gained growing attention as a strategy for
monitoring biodiversity in ecology. However, taxa identifications produced through …
monitoring biodiversity in ecology. However, taxa identifications produced through …
[HTML][HTML] The oral microbiome in periodontal health
M Lenartova, B Tesinska, T Janatova… - Frontiers in Cellular …, 2021 - frontiersin.org
The estimation of oral microbiome (OM) taxonomic composition in periodontally healthy
individuals can often be biased because the clinically periodontally healthy subjects for …
individuals can often be biased because the clinically periodontally healthy subjects for …
[HTML][HTML] Response of soil chemical properties, enzyme activities and microbial communities to biochar application and climate change in a Mediterranean …
Changing climatic conditions (warming and decreasing precipitation) have been found to be
a threat to the agricultural sustainability of Mediterranean croplands. From the climate …
a threat to the agricultural sustainability of Mediterranean croplands. From the climate …
[HTML][HTML] Linking belowground microbial network changes to different tolerance level towards Verticillium wilt of olive
AJ Fernández-González, M Cardoni… - Microbiome, 2020 - Springer
Background Verticillium wilt of olive (VWO) is caused by the soilborne fungal pathogen
Verticillium dahlia e. One of the best VWO management measures is the use of …
Verticillium dahlia e. One of the best VWO management measures is the use of …
[HTML][HTML] Bacterial diversity of diabetic foot ulcers: current status and future prospectives
F Sadeghpour Heravi, M Zakrzewski, K Vickery… - Journal of clinical …, 2019 - mdpi.com
Diabetic foot ulcers (DFUs) and diabetic foot infections (DFIs) are associated with reduced
patient quality of life, lower-extremity amputation, hospitalization, and high morbidity and …
patient quality of life, lower-extremity amputation, hospitalization, and high morbidity and …
A review of machine learning approaches for drug synergy prediction in cancer
A Torkamannia, Y Omidi… - Briefings in Bioinformatics, 2022 - academic.oup.com
Combinational pharmacotherapy with the synergistic/additive effect is a powerful treatment
strategy for complex diseases such as malignancies. Identifying synergistic combinations …
strategy for complex diseases such as malignancies. Identifying synergistic combinations …