[PDF][PDF] The folding of single domain proteins-have we reached a consensus?

TR Sosnick - Biophysical Journal, 2011 - cell.com
The University of North Carolina at Chapel Hill, Chapel Hill, NC, USA. This talk will provide
an overview of new approaches to study and manipulate signaling in living cells and …

When fast is better: protein folding fundamentals and mechanisms from ultrafast approaches

V Munoz, M Cerminara - Biochemical Journal, 2016 - portlandpress.com
Protein folding research stalled for decades because conventional experiments indicated
that proteins fold slowly and in single strokes, whereas theory predicted a complex interplay …

Atomistic Folding Simulations of the Five-Helix Bundle Protein λ6−85

GR Bowman, VA Voelz, VS Pande - Journal of the American …, 2011 - ACS Publications
Protein folding is a classic grand challenge that is relevant to numerous human diseases,
such as protein misfolding diseases like Alzheimer's disease. Solving the folding problem …

Visualizing a one-way protein encounter complex by ultrafast single-molecule mixing

Y Gambin, V VanDelinder, ACM Ferreon, EA Lemke… - Nature …, 2011 - nature.com
We combined rapid microfluidic mixing with single-molecule fluorescence resonance energy
transfer to study the folding kinetics of the intrinsically disordered human protein α-synuclein …

Fast protein folding kinetics

H Gelman, M Gruebele - Quarterly Reviews of Biophysics, 2014 - cambridge.org
Fast-folding proteins have been a major focus of computational and experimental study
because they are accessible to both techniques: they are small and fast enough to be …

[HTML][HTML] Protein unfolding mechanisms and their effects on folding experiments

LJ Lapidus - F1000Research, 2017 - ncbi.nlm.nih.gov
In this review, I discuss the various methods researchers use to unfold proteins in the lab in
order to understand protein folding both in vitro and in vivo. The four main techniques …

Integrated prediction of protein folding and unfolding rates from only size and structural class

D De Sancho, V Muñoz - Physical Chemistry Chemical Physics, 2011 - pubs.rsc.org
Protein stability, folding and unfolding rates are all determined by the multidimensional
folding free energy surface, which in turn is dictated by factors such as size, structure, and …

Predictions from an Ising-like statistical mechanical model on the dynamic and thermodynamic effects of protein surface electrostatics

AN Naganathan - Journal of chemical theory and computation, 2012 - ACS Publications
Charged residues on the surface of a protein are known hot-spots for post-translational
modification, protein/ligand-binding, and tuning conformational stabilities. Recent …

Complex pathways in folding of protein G explored by simulation and experiment

LJ Lapidus, S Acharya, CR Schwantes, L Wu… - Biophysical journal, 2014 - cell.com
The B1 domain of protein G has been a classic model system of folding for decades, the
subject of numerous experimental and computational studies. Most of the experimental work …

Microsecond folding experiments and simulations: a match is made

MB Prigozhin, M Gruebele - Physical Chemistry Chemical Physics, 2013 - pubs.rsc.org
For the past two decades, protein folding experiments have been speeding up from the
second or millisecond time scale to the microsecond time scale, and full-atom simulations …