Recent insights into the vaginal microbiota

S Condori, S Ahannach, L Vander Donck, E Oerlemans… - 2022 - repository.uantwerpen.be
Research on the vaginal microbiome and its relation to women's health has steadily gained
momentum in recent years. Traditionally, vaginal microbiome studies have focused on the …

Metabolome and microbiome analyses of the anti-fatigue mechanism of Acanthopanax senticosus leaves

C Shi, Z Liang, T Li, Q Hao, H Xiang, Q Xie - Food & Function, 2024 - pubs.rsc.org
Acanthopanax senticosus leaves, widely used as a vegetable and tea, are reported to be
beneficial in treating neurological disorders. At present, their anti-fatigue effect remains to be …

Dysbiosis: an indicator of COVID-19 severity in critically ill patients

S Cuenca, Z Soler, G Serrano-Gómez, Z Xie… - International Journal of …, 2022 - mdpi.com
Here, we examined the dynamics of the gut and respiratory microbiomes in severe COVID-
19 patients in need of mechanical ventilation in the intensive care unit (ICU). We recruited …

Shotgun metagenomics reveals interkingdom association between intestinal bacteria and fungi involving competition for nutrients

Z Xie, A Canalda-Baltrons, C d'Enfert, C Manichanh - Microbiome, 2023 - Springer
Background The accuracy of internal-transcribed-spacer (ITS) and shotgun metagenomics
has not been robustly evaluated, and the effect of diet on the composition and function of the …

GSR-DB: a manually curated and optimized taxonomical database for 16S rRNA amplicon analysis

LAG Molano, S Vega-Abellaneda, C Manichanh - Msystems, 2024 - Am Soc Microbiol
Amplicon-based 16S ribosomal RNA sequencing remains a widely used method to profile
microbial communities, especially in low biomass samples, due to its cost-effectiveness and …

Personal traits, lifestyle decisions, and geography shape our dietary intake and consequently our bacterial and fungal gut microbiome

Z Soler, G Serrano-Gómez, M Pons-Tarin… - 2024 - researchsquare.com
Background The Global Burden of Disease 2017 (GBD-2017) study identified high sodium
intake, low whole grain intake, and low fruit consumption as key dietary risk factors for non …

[HTML][HTML] Human gut metatranscriptome changes induced by a fermented milk product are associated with improved tolerance to a flatulogenic diet

I Oyarzun, B Le Nevé, F Yañez, Z Xie, M Pichaud… - Computational and …, 2022 - Elsevier
Healthy plant-based diets rich in fermentable residues may induce gas-related symptoms,
possibly mediated by the gut microbiota. We previously showed that consumption of a …

Integration of fungal and bacterial microbiome sequencing data

Z Xie - 2023 - tdx.cat
The analysis of the bacterial microbiome has become routine, but the study of the fungal
microbiome, or mycobiome, is still hindered by a lack of robust databases and bioinformatic …

[PDF][PDF] Journal of Clinical Case Reports, Medical Images and Health Sciences

O Policiquio, LH Ynoue, L Ferrara, RP Araldi… - …, 2024 - jmedcasereportsimages.org
Background: The safety and efficacy of therapies based on mesenchymal stroma/stem cells
(MSCs) have been well-documented in clinical contexts. However, non-clinical studies …

[PDF][PDF] INTEGRATION OF FUNGAL AND BACTERIAL MICROBIOME SEQUENCE DATA

Z Xie - ddd.uab.cat
First and foremost, I am incredibly grateful to my supervisor, Dr. Chaysavanh Manichanh, for
her unwavering support, patience, and guidance throughout my research. Her dedication to …