Synthetic catalysts inspired by hydrolytic enzymes

MD Nothling, Z Xiao, A Bhaskaran, MT Blyth… - ACS …, 2018 - ACS Publications
Enzymes, as nature's catalysts, speed up the very reactions that make life possible.
Hydrolytic enzymes are a particularly important enzyme class responsible for the catalytic …

Affinity chromatography techniques based on the immobilisation of peptides exhibiting specific binding activity

C Tozzi, L Anfossi, G Giraudi - Journal of Chromatography B, 2003 - Elsevier
Affinity chromatography is one of the powerful techniques in selective purification and
isolation of a great number of compounds. New challenges in scientific research, such as …

Heterochiral tetrapeptide self‐assembly into hydrogel biomaterials for hydrolase mimicry

M Kurbasic, AM Garcia, S Viada… - Journal of Peptide …, 2022 - Wiley Online Library
Self‐assembling short peptides have attracted great interest as enzyme mimics, especially if
the catalytic activity resides solely in the supramolecular structure so that it can be switched …

Automated solid-phase peptide synthesis

DFH Winkler - Peptide Synthesis: Methods and Protocols, 2020 - Springer
The development of solid-phase peptide synthesis by Bruce Merrifield paved the way for a
synthesis carried out by machines. Automated peptide synthesis is a fast and convenient …

Design and synthesis of novel dual-cyclic RGD peptides for αvβ3 integrin targeting

J Liu, X Cheng, X Tian, D Guan, J Ao, Z Wu… - Bioorganic & medicinal …, 2019 - Elsevier
The specific binding of RGD cyclic peptide with integrin α v β 3 attracts great research
interest for tumor-targeting drug delivery. Herein, we designed and synthesized a series of …

Tripeptide self-assembly into bioactive hydrogels: Effects of terminus modification on biocatalysis

M Kurbasic, AM Garcia, S Viada, S Marchesan - Molecules, 2020 - mdpi.com
Bioactive hydrogels based on the self-assembly of tripeptides have attracted great interest in
recent years. In particular, the search is active for sequences that are able to mimic enzymes …

Conformational flexibility in designing peptides for immunology: the molecular dynamics approach

A Stavrakoudis - Current Computer-Aided Drug Design, 2010 - ingentaconnect.com
Computational modeling techniques and computer simulations have become a routine in
biological sciences and have gained great attention from researchers. Molecular dynamics …

Exploring the conformational space of cyclic peptides by a stochastic search method

A Rayan, H Senderowitz, A Goldblum - Journal of Molecular Graphics and …, 2004 - Elsevier
A stochastic search algorithm is applied in order to probe the conformations of cyclic
peptides. The search is conducted in two stages. In the first stage, random conformations are …

Evaluating data mining algorithms using molecular dynamics trajectories

VA Tatsis, C Tjortjis, P Tzirakis - International journal of …, 2013 - inderscienceonline.com
Molecular dynamics simulations provide a sample of a molecule's conformational space.
Experiments on the μs time scale, resulting in large amounts of data, are nowadays routine …

TAC-scaffolded tripeptides as artificial hydrolytic receptors: a combinatorial approach toward esterase mimics

HB Albada, RMJ Liskamp - Journal of Combinatorial Chemistry, 2008 - ACS Publications
In this report, we present the first library of tripodal synthetic receptor molecules containing
three different, temporarily N-terminal protected peptide arms capable of performing …