Ribosome profiling: global views of translation
NT Ingolia, JA Hussmann… - Cold Spring Harbor …, 2019 - cshperspectives.cshlp.org
The translation of messenger RNA (mRNA) into protein and the folding of the resulting
protein into an active form are prerequisites for virtually every cellular process and represent …
protein into an active form are prerequisites for virtually every cellular process and represent …
Circadian entrainment triggers maturation of human in vitro islets
JR Alvarez-Dominguez, J Donaghey, N Rasouli… - Cell stem cell, 2020 - cell.com
Stem-cell-derived tissues could transform disease research and therapy, yet most methods
generate functionally immature products. We investigate how human pluripotent stem cells …
generate functionally immature products. We investigate how human pluripotent stem cells …
Emerging mechanisms of long noncoding RNA function during normal and malignant hematopoiesis
JR Alvarez-Dominguez… - Blood, The Journal of the …, 2017 - ashpublications.org
Long noncoding RNAs (lncRNAs) are increasingly recognized as vital components of gene
programs controlling cell differentiation and function. Central to their functions is an ability to …
programs controlling cell differentiation and function. Central to their functions is an ability to …
[HTML][HTML] Absolute quantification of transcription factors reveals principles of gene regulation in erythropoiesis
MA Gillespie, CG Palii, D Sanchez-Taltavull… - Molecular cell, 2020 - cell.com
Dynamic cellular processes such as differentiation are driven by changes in the abundances
of transcription factors (TFs). However, despite years of studies, our knowledge about the …
of transcription factors (TFs). However, despite years of studies, our knowledge about the …
Alternative splicing and related RNA binding proteins in human health and disease
Y Tao, Q Zhang, H Wang, X Yang, H Mu - Signal Transduction and …, 2024 - nature.com
Alternative splicing (AS) serves as a pivotal mechanism in transcriptional regulation,
engendering transcript diversity, and modifications in protein structure and functionality …
engendering transcript diversity, and modifications in protein structure and functionality …
mTOR-and LARP1-dependent regulation of TOP mRNA poly (A) tail and ribosome loading
K Ogami, Y Oishi, K Sakamoto, M Okumura… - Cell reports, 2022 - cell.com
Translation of 5′ terminal oligopyrimidine (TOP) mRNAs encoding the protein synthesis
machinery is strictly regulated by an amino-acid-sensing mTOR pathway. However, its …
machinery is strictly regulated by an amino-acid-sensing mTOR pathway. However, its …
[HTML][HTML] Some like it translated: small ORFs in the 5′ UTR
PF Renz, F Valdivia-Francia, A Sendoel - Experimental cell research, 2020 - Elsevier
Abstract The 5′ untranslated region (5′ UTR) is critical in determining post-transcriptional
control, which is partly mediated by short upstream open reading frames (uORFs) present in …
control, which is partly mediated by short upstream open reading frames (uORFs) present in …
The super-enhancer-derived alncRNA-EC7/bloodlinc potentiates red blood cell development in trans
JR Alvarez-Dominguez, M Knoll, AA Gromatzky… - Cell reports, 2017 - cell.com
Enhancer-derived RNAs are thought to act locally by contributing to their parent enhancer
function. Whether large domains of clustered enhancers (super-enhancers) also produce cis …
function. Whether large domains of clustered enhancers (super-enhancers) also produce cis …
Local translation in nuclear condensate amyloid bodies
PR Theodoridis, M Bokros, D Marijan… - Proceedings of the …, 2021 - National Acad Sciences
Biomolecular condensates concentrate molecules to facilitate basic biochemical processes,
including transcription and DNA replication. While liquid-like condensates have been …
including transcription and DNA replication. While liquid-like condensates have been …