Physics-based computational and theoretical approaches to intrinsically disordered proteins
Highlights•Liquid-liquid phase separation underlies the formation of membraneless
organelles within cells.•Theory and molecular simulations help to relate interactions at the …
organelles within cells.•Theory and molecular simulations help to relate interactions at the …
Molecular crowding: the history and development of a scientific paradigm
It is now generally accepted that macromolecules do not act in isolation but “live” in a
crowded environment, that is, an environment populated by numerous different molecules …
crowded environment, that is, an environment populated by numerous different molecules …
Hydrophobicity of arginine leads to reentrant liquid-liquid phase separation behaviors of arginine-rich proteins
Intrinsically disordered proteins rich in cationic amino acid groups can undergo Liquid-
Liquid Phase Separation (LLPS) in the presence of charge-balancing anionic counterparts …
Liquid Phase Separation (LLPS) in the presence of charge-balancing anionic counterparts …
Detecting and quantifying liquid–liquid phase separation in living cells by model-free calibrated half-bleaching
F Muzzopappa, J Hummert, M Anfossi… - Nature …, 2022 - nature.com
Cells contain numerous substructures that have been proposed to form via liquid–liquid
phase separation (LLPS). It is currently debated how to reliably distinguish LLPS from other …
phase separation (LLPS). It is currently debated how to reliably distinguish LLPS from other …
Spatiotemporal modulations in heterotypic condensates of prion and α-synuclein control phase transitions and amyloid conversion
Biomolecular condensation via liquid-liquid phase separation of proteins and nucleic acids
is associated with a range of critical cellular functions and neurodegenerative diseases …
is associated with a range of critical cellular functions and neurodegenerative diseases …
Multistep desolvation as a fundamental principle governing peptide self-assembly through liquid–liquid phase separation
C Yuan, R Xing, J Cui, W Fan, J Li, X Yan - CCS Chemistry, 2024 - chinesechemsoc.org
Biomolecular self-assembly based on peptides and proteins is a general phenomenon
encountered in natural and synthetic systems. Liquid–liquid phase separation (LLPS) is …
encountered in natural and synthetic systems. Liquid–liquid phase separation (LLPS) is …
Molecular mechanism for the synchronized electrostatic coacervation and co-aggregation of alpha-synuclein and tau
P Gracia, D Polanco, J Tarancón-Díez, I Serra… - Nature …, 2022 - nature.com
Amyloid aggregation of α-synuclein (αS) is the hallmark of Parkinson's disease and other
synucleinopathies. Recently, Tau protein, generally associated with Alzheimer's disease …
synucleinopathies. Recently, Tau protein, generally associated with Alzheimer's disease …
Phase separation and molecular ordering of the prion-like domain of the Arabidopsis thermosensory protein EARLY FLOWERING 3
S Hutin, JR Kumita, VI Strotmann… - Proceedings of the …, 2023 - National Acad Sciences
Liquid–liquid phase separation (LLPS) is an important mechanism enabling the dynamic
compartmentalization of macromolecules, including complex polymers such as proteins and …
compartmentalization of macromolecules, including complex polymers such as proteins and …
Fluorescent protein lifetimes report densities and phases of nuclear condensates during embryonic stem-cell differentiation
K Joron, JO Viegas, L Haas-Neill, S Bier, P Drori… - Nature …, 2023 - nature.com
Fluorescent proteins (FP) are frequently used for studying proteins inside cells. In advanced
fluorescence microscopy, FPs can report on additional intracellular variables. One variable …
fluorescence microscopy, FPs can report on additional intracellular variables. One variable …
Liquid–liquid phase separation? Ask the water!
S Pezzotti, B König, S Ramos… - The Journal of …, 2023 - ACS Publications
Water is more than an inert spectator during liquid–liquid phase separation (LLPS), the
reversible compartmentalization of protein solutions into a protein-rich and a dilute phase …
reversible compartmentalization of protein solutions into a protein-rich and a dilute phase …