Single-cell transcriptome analysis in plants: advances and challenges

R Shaw, X Tian, J Xu - Molecular Plant, 2021 - cell.com
The rapid and enthusiastic adoption of single-cell RNA sequencing (scRNA-seq) has
demonstrated that this technology is far more than just another way to perform transcriptome …

Advances and opportunities in single-cell transcriptomics for plant research

C Seyfferth, J Renema, JR Wendrich… - Annual Review of …, 2021 - annualreviews.org
Single-cell approaches are quickly changing our view on biological systems by increasing
the spatiotemporal resolution of our analyses to the level of the individual cell. The field of …

Identification of new marker genes from plant single‐cell RNA‐seq data using interpretable machine learning methods

H Yan, J Lee, Q Song, Q Li, J Schiefelbein… - New …, 2022 - Wiley Online Library
An essential step in the analysis of single‐cell RNA sequencing data is to classify cells into
specific cell types using marker genes. In this study, we have developed a machine learning …

Unique and distinct identities and functions of leaf phloem cells revealed by single cell transcriptomics

JY Kim, E Symeonidi, TY Pang, T Denyer, D Weidauer… - bioRxiv, 2020 - biorxiv.org
The leaf vasculature plays a key role in solute translocation. Veins consist of at least seven
distinct cell types, with specific roles in transport, metabolism, and signaling. Little is known …