Proteomics by mass spectrometry: approaches, advances, and applications

JR Yates, CI Ruse… - Annual review of …, 2009 - annualreviews.org
Mass spectrometry (MS) is the most comprehensive and versatile tool in large-scale
proteomics. In this review, we dissect the overall framework of the MS experiment into its key …

Synthesis and applications of functionalized magnetic materials in sample preparation

XS Li, GT Zhu, YB Luo, BF Yuan, YQ Feng - TrAC Trends in Analytical …, 2013 - Elsevier
Functionalized magnetic materials (FMMs) have been widely used in analytical chemistry.
For sample preparation, FMMs show many advantages including easy surface modification …

[HTML][HTML] Enrichment techniques employed in phosphoproteomics

J Fíla, D Honys - Amino acids, 2012 - Springer
Rapid changes of protein phosphorylation play a crucial role in the regulation of many
cellular processes. Being post-translationally modified, phosphoproteins are often present in …

Specific phosphopeptide enrichment with immobilized titanium ion affinity chromatography adsorbent for phosphoproteome analysis

H Zhou, M Ye, J Dong, G Han, X Jiang… - Journal of proteome …, 2008 - ACS Publications
The elucidation of protein post-translational modifications, such as phosphorylation, remains
a challenging analytical task for proteomic studies. Since many of the proteins targeted for …

Techniques for phosphopeptide enrichment prior to analysis by mass spectrometry

JD Dunn, GE Reid, ML Bruening - Mass spectrometry reviews, 2010 - Wiley Online Library
Mass spectrometry is the tool of choice to investigate protein phosphorylation, which plays a
vital role in cell regulation and diseases such as cancer. However, low abundances of …

[HTML][HTML] Immobilized zirconium ion affinity chromatography for specific enrichment of phosphopeptides in phosphoproteome analysis

S Feng, M Ye, H Zhou, X Jiang, X Jiang, H Zou… - Molecular & Cellular …, 2007 - ASBMB
Large scale characterization of phosphoproteins requires highly specific methods for
purification of phosphopeptides because of the low abundance of phosphoproteins and …

Phosphopeptide enrichment using metal oxide affinity chromatography

A Leitner - TrAC Trends in Analytical Chemistry, 2010 - Elsevier
The demand for effective sample preparation strategies that enable the in-depth study of
protein phosphorylation has spawned a number of selective affinity techniques that allow …

Recent advances of mesoporous materials in sample preparation

L Zhao, H Qin, R Wu, H Zou - Journal of Chromatography A, 2012 - Elsevier
Sample preparation has been playing an important role in the analysis of complex samples.
Mesoporous materials as the promising adsorbents have gained increasing research …

Large‐scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography

G Han, M Ye, H Zhou, X Jiang, S Feng, X Jiang… - …, 2008 - Wiley Online Library
The mixture of phosphopeptides enriched from proteome samples are very complex. To
reduce the complexity it is necessary to fractionate the phosphopeptides. However …

Phosphoproteomics for the masses

PA Grimsrud, DL Swaney, CD Wenger… - ACS chemical …, 2010 - ACS Publications
Protein phosphorylation serves as a primary mechanism of signal transduction in the cells of
biological organisms. Technical advancements over the last several years in mass …