High-throughput experimental technologies are generating increasingly massive and
complex genomic data sets. The sheer enormity and heterogeneity of these data threaten to …

Post-Sanger sequencing methods produce tons of data, and there is a generalagreement
that the challenge to store and process them must be addressedwith data compression. In …

Storage and transmission of the data produced by modern DNA sequencing instruments has
become a major concern, which prompted the Pistoia Alliance to pose the …

Deep shotgun sequencing and analysis of genomes, transcriptomes, amplified single-cell
genomes, and metagenomes has enabled investigation of a wide range of organisms and …

The ever increasing growth of the production of high-throughput sequencing data poses a
serious challenge to the storage, processing and transmission of these data. As frequently …

Motivation: The data deluge phenomenon is becoming a serious problem in most genomic
centers. To alleviate it, general purpose tools, such as gzip, are used to compress the data …

The exponential growth of high-throughput DNA sequence data has posed great challenges
to genomic data storage, retrieval and transmission. Compression is a critical tool to address …

Background The increasing production of genomic data has led to an intensified need for
models that can cope efficiently with the lossless compression of DNA sequences. Important …

In many applications, sets of similar texts or sequences are of high importance. Prominent
examples are revision histories of documents or genomic sequences. Modern high …

Abstract Motivation: Next Generation Sequencing (NGS) technologies have revolutionized
genomic research by reducing the cost of whole genome sequencing. One of the biggest …