Equitability, mutual information, and the maximal information coefficient

JB Kinney, GS Atwal - … of the National Academy of Sciences, 2014 - National Acad Sciences
How should one quantify the strength of association between two random variables without
bias for relationships of a specific form? Despite its conceptual simplicity, this notion of …

[PDF][PDF] 统计相关性分析方法研究进展

樊嵘, 孟大志, 徐大舜 - 数学建模及其应用, 2014 - lagrange.math.siu.edu
系统综述了自19 世纪开始至今常用的统计相关性的方法, 例如Pearson 和Spearman 相关系数,
CorGc 和CovGc 相关性及距离相关性方法. 重点介绍了2011 年提出的MIC 方法以及由此引发的 …

Efficient estimation of mutual information for strongly dependent variables

S Gao, G Ver Steeg, A Galstyan - Artificial intelligence and …, 2015 - proceedings.mlr.press
We demonstrate that a popular class of non-parametric mutual information (MI) estimators
based on k-nearest-neighbor graphs requires number of samples that scales exponentially …

Distance correlation application to gene co-expression network analysis

J Hou, X Ye, W Feng, Q Zhang, Y Han, Y Liu, Y Li… - BMC …, 2022 - Springer
Background To construct gene co-expression networks, it is necessary to evaluate the
correlation between different gene expression profiles. However, commonly used correlation …

From distance correlation to multiscale graph correlation

C Shen, CE Priebe, JT Vogelstein - Journal of the American …, 2020 - Taylor & Francis
Understanding and developing a correlation measure that can detect general dependencies
is not only imperative to statistics and machine learning, but also crucial to general scientific …

Equitability analysis of the maximal information coefficient, with comparisons

D Reshef, Y Reshef, M Mitzenmacher… - arXiv preprint arXiv …, 2013 - arxiv.org
A measure of dependence is said to be equitable if it gives similar scores to equally noisy
relationships of different types. Equitability is important in data exploration when the goal is …

An empirical study of the maximal and total information coefficients and leading measures of dependence

DN Reshef, YA Reshef, PC Sabeti, M Mitzenmacher - 2018 - projecteuclid.org
An empirical study of the maximal and total information coefficients and leading measures
of dependence Page 1 The Annals of Applied Statistics 2018, Vol. 12, No. 1, 123–155 https://doi.org/10.1214/17-AOAS1093 …

Statistical methods for microbiome compositional data network inference: a survey

L Chen, H Wan, Q He, S He, M Deng - Journal of Computational …, 2022 - liebertpub.com
Microbes can be found almost everywhere in the world. They are not isolated, but rather
interact with each other and establish connections with their living environments. Studying …

Inferring nonlinear gene regulatory networks from gene expression data based on distance correlation

X Guo, Y Zhang, W Hu, H Tan, X Wang - PloS one, 2014 - journals.plos.org
Nonlinear dependence is general in regulation mechanism of gene regulatory networks
(GRNs). It is vital to properly measure or test nonlinear dependence from real data for …

The affinely invariant distance correlation

J Dueck, D Edelmann, T Gneiting, D Richards - 2014 - projecteuclid.org
Székely, Rizzo and Bakirov (Ann. Statist. 35 (2007) 2769–2794) and Székely and Rizzo
(Ann. Appl. Statist. 3 (2009) 1236–1265), in two seminal papers, introduced the powerful …