Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods
Metazoan metabarcoding is emerging as an essential strategy for inventorying biodiversity,
with diverse projects currently generating massive quantities of community-level data. The …
with diverse projects currently generating massive quantities of community-level data. The …
Coming of age for COI metabarcoding of whole organism community DNA: towards bioinformatic harmonisation
Metabarcoding of DNA extracted from community samples of whole organisms (whole
organism community DNA, wocDNA) is increasingly being applied to terrestrial, marine and …
organism community DNA, wocDNA) is increasingly being applied to terrestrial, marine and …
Multiple species delimitation approaches with COI barcodes poorly fit each other and morphospecies – An integrative taxonomy case of Sri Lankan Sericini chafers …
UGSL Ranasinghe, J Eberle, J Thormann… - Ecology and …, 2022 - Wiley Online Library
DNA taxonomy including barcoding and metabarcoding is widely used to explore the
diversity in biodiversity hotspots. In most of these hotspot areas, chafers are represented by …
diversity in biodiversity hotspots. In most of these hotspot areas, chafers are represented by …
Validated removal of nuclear pseudogenes and sequencing artefacts from mitochondrial metabarcode data
Metabarcoding of Metazoa using mitochondrial genes may be confounded by both the
accumulation of PCR and sequencing artefacts and the co‐amplification of nuclear …
accumulation of PCR and sequencing artefacts and the co‐amplification of nuclear …
Community metabarcoding reveals the relative role of environmental filtering and spatial processes in metacommunity dynamics of soil microarthropods across a …
V Noguerales, E Meramveliotakis… - Molecular …, 2023 - Wiley Online Library
Disentangling the relative role of environmental filtering and spatial processes in driving
metacommunity structure across mountainous regions remains challenging, as the way we …
metacommunity structure across mountainous regions remains challenging, as the way we …
Connecting high‐throughput biodiversity inventories: Opportunities for a site‐based genomic framework for global integration and synthesis
High‐throughput sequencing (HTS) is increasingly being used for the characterization and
monitoring of biodiversity. If applied in a structured way, across broad geographical scales, it …
monitoring of biodiversity. If applied in a structured way, across broad geographical scales, it …
Comparison of traditional and DNA metabarcoding samples for monitoring tropical soil arthropods (Formicidae, Collembola and Isoptera)
The soil fauna of the tropics remains one of the least known components of the biosphere.
Long-term monitoring of this fauna is hampered by the lack of taxonomic expertise and …
Long-term monitoring of this fauna is hampered by the lack of taxonomic expertise and …
Joint analysis of species and genetic variation to quantify the role of dispersal and environmental constraints in community turnover
Spatial turnover of biological communities is determined by both dispersal and
environmental constraints. However, we lack quantitative predictions about how these …
environmental constraints. However, we lack quantitative predictions about how these …
[PDF][PDF] Abundance estimation with DNA metabarcoding–recent advancements for terrestrial arthropods
Biodiversity is declining at alarming rates worldwide and large-scale monitoring is urgently
needed to understand changes and their drivers. While classical taxonomic identification of …
needed to understand changes and their drivers. While classical taxonomic identification of …
Hidden island endemic species and their implications for cryptic speciation within soil arthropods
AJ Pérez‐Delgado, P Arribas… - Journal of …, 2022 - Wiley Online Library
Aim Specialisation to the soil environment is expected to constrain the spatial scale of
diversification within animal lineages. In this context, flightless arthropod lineages, adapted …
diversification within animal lineages. In this context, flightless arthropod lineages, adapted …