The increasing diversity of functions attributed to the SAFB family of RNA-/DNA-binding proteins

M Norman, C Rivers, YB Lee, J Idris… - Biochemical …, 2016 - portlandpress.com
RNA-binding proteins play a central role in cellular metabolism by orchestrating the complex
interactions of coding, structural and regulatory RNA species. The SAFB (scaffold …

Nuclear architecture and the structural basis of mitotic memory

M Soujanya, A Bihani, N Hajirnis, RU Pathak… - Chromosome …, 2023 - Springer
The nucleus is a complex organelle that hosts the genome and is essential for vital
processes like DNA replication, DNA repair, transcription, and splicing. The genome is non …

[HTML][HTML] SAFB2 enables the processing of suboptimal stem-loop structures in clustered primary miRNA transcripts

K Hutter, M Lohmüller, A Jukic, F Eichin, S Avci, V Labi… - Molecular cell, 2020 - cell.com
Many microRNAs (miRNAs) are generated from primary transcripts containing multiple
clustered stem-loop structures that are thought to be recognized and cleaved by the …

[HTML][HTML] FUS interacts with nuclear matrix-associated protein SAFB1 as well as Matrin3 to regulate splicing and ligand-mediated transcription

A Yamaguchi, K Takanashi - Scientific reports, 2016 - nature.com
Abstract FUS (Fused-in-Sarcoma) is a multifunctional DNA/RNA binding protein linked to
familial amyotrophic lateral sclerosis/frontotemporal dementia (ALS/FTD). Since FUS is …

Dynamics of hnRNPs and omega speckles in normal and heat shocked live cell nuclei of Drosophila melanogaster

AK Singh, SC Lakhotia - Chromosoma, 2015 - Springer
The nucleus limited long-noncoding hsrω-n transcripts, hnRNPs, and some other RNA
processing proteins organize nucleoplasmic omega speckles in Drosophila. Unlike other …

Enhancer of rudimentary homologue interacts with scaffold attachment factor B at the nuclear matrix to regulate SR protein phosphorylation

S Drakouli, A Lyberopoulou… - The FEBS …, 2017 - Wiley Online Library
Scaffold attachment factor B1 (SAFB 1) is an integral component of the nuclear matrix of
vertebrate cells. It binds to DNA on scaffold/matrix attachment region elements, as well as to …

[HTML][HTML] Hsrω and Other lncRNAs in Neuronal Functions and Disorders in Drosophila

AK Singh - Life, 2022 - mdpi.com
Long noncoding RNAs (lncRNAs) have a crucial role in epigenetic, transcriptional and
posttranscriptional regulation of gene expression. Many of these regulatory lncRNAs, such …

Drosophila satellite repeats at the intersection of chromatin, gene regulation and evolution

MP Lauria Sneideman, VH Meller - Satellite DNAs in physiology and …, 2021 - Springer
Satellite repeats make up a large fraction of the genomes of many higher eukaryotes. Until
recently these sequences were viewed as molecular parasites with few functions …

In Vivo Mapping of Arabidopsis Scaffold/Matrix Attachment Regions Reveals Link to Nucleosome-Disfavoring Poly(dA:dT) Tracts

PE Pascuzzi, MA Flores-Vergara, TJ Lee… - The Plant …, 2014 - academic.oup.com
Scaffold or matrix attachment regions (S/MARs) are found in all eukaryotes. The pattern of
distribution and genomic context of S/MARs is thought to be important for processes such as …

Beyond cell-cell adhesion: Emerging roles of the tight junction scaffold ZO-2

A Traweger, S Toepfer, RN Wagner… - Tissue …, 2013 - Taylor & Francis
Zonula occludens proteins (ZO-1, ZO-2, ZO-3), which belong to the family of membrane-
associated guanylate kinase (MAGUK) homologs, serve as molecular hubs for the assembly …