Twelve years into genomic selection in forest trees: climbing the slope of enlightenment of marker assisted tree breeding
D Grattapaglia - Forests, 2022 - mdpi.com
Twelve years have passed since the early outlooks of applying genomic selection (GS) to
forest tree breeding, initially based on deterministic simulations, soon followed by empirical …
forest tree breeding, initially based on deterministic simulations, soon followed by empirical …
Achievements and challenges of genomics-assisted breeding in forest trees: From marker-assisted selection to genome editing
S Ahmar, P Ballesta, M Ali, F Mora-Poblete - International Journal of …, 2021 - mdpi.com
Forest tree breeding efforts have focused mainly on improving traits of economic importance,
selecting trees suited to new environments or generating trees that are more resilient to …
selecting trees suited to new environments or generating trees that are more resilient to …
The Peach v2. 0 release: high-resolution linkage mapping and deep resequencing improve chromosome-scale assembly and contiguity
Background The availability of the peach genome sequence has fostered relevant research
in peach and related Prunus species enabling the identification of genes underlying …
in peach and related Prunus species enabling the identification of genes underlying …
Inferring continuous and discrete population genetic structure across space
An important step in the analysis of genetic data is to describe and categorize natural
variation. Individuals that live close together are, on average, more genetically similar than …
variation. Individuals that live close together are, on average, more genetically similar than …
Population genomics of Populus trichocarpa identifies signatures of selection and adaptive trait associations
Forest trees are dominant components of terrestrial ecosystems that have global ecological
and economic importance. Despite distributions that span wide environmental gradients …
and economic importance. Despite distributions that span wide environmental gradients …
Evaluation of redundancy analysis to identify signatures of local adaptation
T Capblancq, K Luu, MGB Blum… - Molecular ecology …, 2018 - Wiley Online Library
Ordination is a common tool in ecology that aims at representing complex biological
information in a reduced space. In landscape genetics, ordination methods such as principal …
information in a reduced space. In landscape genetics, ordination methods such as principal …
Geographical and environmental gradients shape phenotypic trait variation and genetic structure in Populus trichocarpa
P opulus trichocarpa is widespread across western North America spanning extensive
variation in photoperiod, growing season and climate. We investigated trait variation in P …
variation in photoperiod, growing season and climate. We investigated trait variation in P …
Breeding progress and preparedness for mass‐scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar
J Clifton‐Brown, A Harfouche, MD Casler… - Gcb …, 2019 - Wiley Online Library
Genetic improvement through breeding is one of the key approaches to increasing biomass
supply. This paper documents the breeding progress to date for four perennial biomass …
supply. This paper documents the breeding progress to date for four perennial biomass …
Genome‐wide association implicates numerous genes underlying ecological trait variation in natural populations of Populus trichocarpa
In order to uncover the genetic basis of phenotypic trait variation, we used 448 unrelated
wild accessions of black cottonwood (Populus trichocarpa) from much of its range in western …
wild accessions of black cottonwood (Populus trichocarpa) from much of its range in western …
Impacts of degraded DNA on restriction enzyme associated DNA sequencing (RADS eq)
Degraded DNA from suboptimal field sampling is common in molecular ecology. However,
its impact on techniques that use restriction site associated next‐generation DNA …
its impact on techniques that use restriction site associated next‐generation DNA …