A guide to systems-level immunomics

L Bonaguro, J Schulte-Schrepping, T Ulas… - Nature …, 2022 - nature.com
The immune system is highly complex and distributed throughout an organism, with
hundreds to thousands of cell states existing in parallel with diverse molecular pathways …

High-throughput single-сell sequencing in cancer research

Q Jia, H Chu, Z Jin, H Long, B Zhu - Signal Transduction and Targeted …, 2022 - nature.com
With advances in sequencing and instrument technology, bioinformatics analysis is being
applied to batches of massive cells at single-cell resolution. High-throughput single-cell …

Transcriptomic classes of BCR-ABL1 lymphoblastic leukemia

JC Kim, M Chan-Seng-Yue, S Ge, AGX Zeng, K Ng… - Nature …, 2023 - nature.com
In BCR-ABL1 lymphoblastic leukemia, treatment heterogeneity to tyrosine kinase inhibitors
(TKIs), especially in the absence of kinase domain mutations in BCR-ABL1, is poorly …

Integration of spatial and single-cell data across modalities with weakly linked features

S Chen, B Zhu, S Huang, JW Hickey, KZ Lin… - Nature …, 2023 - nature.com
Although single-cell and spatial sequencing methods enable simultaneous measurement of
more than one biological modality, no technology can capture all modalities within the same …

[PDF][PDF] Clonally resolved single-cell multi-omics identifies routes of cellular differentiation in acute myeloid leukemia

S Beneyto-Calabuig, AK Merbach, JA Kniffka, M Antes… - Cell Stem Cell, 2023 - cell.com
Inter-patient variability and the similarity of healthy and leukemic stem cells (LSCs) have
impeded the characterization of LSCs in acute myeloid leukemia (AML) and their …

Single-cell immune profiling reveals thymus-seeding populations, T cell commitment, and multilineage development in the human thymus

M Cordes, K Canté-Barrett, EB van den Akker… - Science …, 2022 - science.org
T cell development in the mouse thymus has been studied extensively, but less is known
regarding T cell development in the human thymus. We used a combination of single-cell …

Delivery of PEGylated liposomal doxorubicin by bispecific antibodies improves treatment in models of high-risk childhood leukemia

E Moles, CB Howard, P Huda, M Karsa… - Science Translational …, 2023 - science.org
High-risk childhood leukemia has a poor prognosis because of treatment failure and toxic
side effects of therapy. Drug encapsulation into liposomal nanocarriers has shown clinical …

Skull bone marrow channels as immune gateways to the central nervous system

JA Mazzitelli, FE Pulous, LCD Smyth, Z Kaya… - Nature …, 2023 - nature.com
Decades of research have characterized diverse immune cells surveilling the CNS. More
recently, the discovery of osseous channels (so-called 'skull channels') connecting the …

A novel type of monocytic leukemia stem cell revealed by the clinical use of venetoclax-based therapy

S Pei, IT Shelton, AE Gillen, BM Stevens, M Gasparetto… - Cancer Discovery, 2023 - AACR
The BCL2 inhibitor venetoclax has recently emerged as an important component of acute
myeloid leukemia (AML) therapy. Notably, use of this agent has revealed a previously …

M2 macrophages drive leukemic transformation by imposing resistance to phagocytosis and improving mitochondrial metabolism

I Weinhäuser, DA Pereira-Martins, LY Almeida… - Science …, 2023 - science.org
It is increasingly becoming clear that cancers are a symbiosis of diverse cell types and tumor
clones. Combined single-cell RNA sequencing, flow cytometry, and immunohistochemistry …