RNomics in Archaea reveals a further link between splicing of archaeal introns and rRNA processing
The bulge–helix–bulge (BHB) motif recognised by the archaeal splicing endonuclease is
also found in the long processing stems of archaeal rRNA precursors in which it is cleaved …
also found in the long processing stems of archaeal rRNA precursors in which it is cleaved …
Nanopore-based RNA sequencing deciphers the formation, processing, and modification steps of rRNA intermediates in archaea
F Grünberger, M Jüttner, R Knüppel, S Ferreira-Cerca… - RNA, 2023 - rnajournal.cshlp.org
Ribosomal RNA (rRNA) maturation in archaea is a complex multistep process that requires
well-defined endo-and exoribonuclease activities to generate fully mature linear rRNAs …
well-defined endo-and exoribonuclease activities to generate fully mature linear rRNAs …
Ribosome biogenesis: role of small nucleolar RNA in maturation of eukaryotic rRNA
SA Gerbi, AV Borovjagin, M Ezrokhi… - Cold Spring Harbor …, 2001 - symposium.cshlp.org
A recent study on yeast U3 snoRNA (Kufel et al. 2000) indicates that several events precede
the addition of the trimethylguanosine cap at the 5 end. Yeast U3 snoRNA is made as a …
the addition of the trimethylguanosine cap at the 5 end. Yeast U3 snoRNA is made as a …
A versatile cis-acting element reporter system to study the function, maturation and stability of ribosomal RNA mutants in archaea
M Jüttner, M Weiß, N Ostheimer, C Reglin… - Nucleic Acids …, 2020 - academic.oup.com
General molecular principles of ribosome biogenesis have been well explored in bacteria
and eukaryotes. Collectively, these studies have revealed important functional differences …
and eukaryotes. Collectively, these studies have revealed important functional differences …
[PDF][PDF] Exploring prokaryotic transcription, operon structures, rRNA maturation and modifications using Nanopore-based native RNA sequencing
F Grünberger, R Knüppel, M Jüttner, M Fenk, A Borst… - BioRxiv, 2020 - researchgate.net
The prokaryotic transcriptome is shaped by transcriptional and posttranscriptional events
that 35 define the characteristics of an RNA, including transcript boundaries, the base …
that 35 define the characteristics of an RNA, including transcript boundaries, the base …
Stability of mRNA in the hyperthermophilic archaeon Sulfolobus solfataricus.
Archaea-like bacteria are prokaryotes but, in contrast, use eukaryotic-like systems for key
aspects of DNA, RNA, and protein metabolism. mRNA is typically unstable in bacteria and …
aspects of DNA, RNA, and protein metabolism. mRNA is typically unstable in bacteria and …
Comprehensive analysis of the pre-ribosomal RNA maturation pathway in a methanoarchaeon exposes the conserved circularization and linearization mode in …
L Qi, J Li, J Jia, L Yue, X Dong - RNA biology, 2020 - Taylor & Francis
The ribosomal RNA (rRNA) genes are generally organized as an operon and cotranscribed
into a polycistronic precursor; therefore, processing and maturation of pre-rRNAs are …
into a polycistronic precursor; therefore, processing and maturation of pre-rRNAs are …
Global Analysis of mRNA Decay in Halobacterium salinarum NRC-1 at Single-Gene Resolution Using DNA Microarrays
S Hundt, A Zaigler, C Lange, J Soppa… - Journal of …, 2007 - Am Soc Microbiol
ABSTRACT RNA degradation is an important factor in the regulation of gene expression. It
allows organisms to quickly respond to changing environmental conditions by adapting the …
allows organisms to quickly respond to changing environmental conditions by adapting the …
Individual gvp transcript segments in Haloferax mediterranei exhibit varying half‐lives, which are differentially affected by salt concentration and growth phase
A Jäger, R Samorski, F Pfeifer, G Klug - Nucleic acids research, 2002 - academic.oup.com
The mc‐gvp genes for gas vesicle formation in Haloferax mediterranei are transcribed from
two promoters located in front of the mc‐gvpA and mc‐gvpD genes. The different transcripts …
two promoters located in front of the mc‐gvpA and mc‐gvpD genes. The different transcripts …
Functional importance of crenarchaea-specific extra-loop revealed by an X-ray structure of a heterotetrameric crenarchaeal splicing endonuclease
S Yoshinari, T Shiba, DK Inaoka, T Itoh… - Nucleic acids …, 2009 - academic.oup.com
Archaeal splicing endonucleases (EndAs) are currently classified into three groups. Two
groups require a single subunit protein to form a homodimer or homotetramer. The third …
groups require a single subunit protein to form a homodimer or homotetramer. The third …