Gene expression profiling of plants under salt stress

A Jamil, S Riaz, M Ashraf, MR Foolad - Critical Reviews in Plant …, 2011 - Taylor & Francis
Soil salinity is among the leading environmental stresses affecting global agriculture,
causing billions of dollars in crop damages every year. Regardless of the cause, ion toxicity …

MicroRNAs: key regulators of stem cells

VK Gangaraju, H Lin - Nature reviews Molecular cell biology, 2009 - nature.com
The hallmark of a stem cell is its ability to self-renew and to produce numerous differentiated
cells. This unique property is controlled by dynamic interplays between extrinsic signalling …

The TIGR rice genome annotation resource: improvements and new features

S Ouyang, W Zhu, J Hamilton, H Lin… - Nucleic acids …, 2007 - academic.oup.com
Abstract In The Institute for Genomic Research Rice Genome Annotation project (), we have
continued to update the rice genome sequence with new data and improve the quality of the …

Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells

RD Morin, MD O'Connor, M Griffith… - Genome …, 2008 - genome.cshlp.org
MicroRNAs (miRNAs) are emerging as important, albeit poorly characterized, regulators of
biological processes. Key to further elucidation of their roles is the generation of more …

[HTML][HTML] High-Throughput Sequencing of Arabidopsis microRNAs: Evidence for Frequent Birth and Death of MIRNA Genes

N Fahlgren, MD Howell, KD Kasschau, EJ Chapman… - PloS one, 2007 - journals.plos.org
In plants, microRNAs (miRNAs) comprise one of two classes of small RNAs that function
primarily as negative regulators at the posttranscriptional level. Several MIRNA genes in the …

Global identification of microRNA–target RNA pairs by parallel analysis of RNA ends

MA German, M Pillay, DH Jeong, A Hetawal… - Nature …, 2008 - nature.com
MicroRNAs (miRNAs) are important regulatory molecules in most eukaryotes and
identification of their target mRNAs is essential for their functional analysis. Whereas …

Small RNAs as big players in plant abiotic stress responses and nutrient deprivation

R Sunkar, V Chinnusamy, J Zhu, JK Zhu - Trends in plant science, 2007 - cell.com
Abiotic stress is one of the primary causes of crop losses worldwide. Much progress has
been made in unraveling the complex stress response mechanisms, particularly in the …

Genome-wide analysis of basic/helix-loop-helix transcription factor family in rice and Arabidopsis

X Li, X Duan, H Jiang, Y Sun, Y Tang, Z Yuan… - Plant …, 2006 - academic.oup.com
The basic/helix-loop-helix (bHLH) transcription factors and their homologs form a large
family in plant and animal genomes. They are known to play important roles in the …

The Diversification of Plant NBS-LRR Defense Genes Directs the Evolution of MicroRNAs That Target Them

Y Zhang, R Xia, H Kuang… - Molecular biology and …, 2016 - academic.oup.com
High expression of plant nucleotide binding site leucine-rich repeat (NBS-LRR) defense
genes is often lethal to plant cells, a phenotype perhaps associated with fitness costs. Plants …

Identification and expression profiling analysis of TIFY family genes involved in stress and phytohormone responses in rice

H Ye, H Du, N Tang, X Li, L Xiong - Plant molecular biology, 2009 - Springer
The TIFY family is a novel plant-specific gene family involved in the regulation of diverse
plant-specific biologic processes, such as development and responses to phytohormones, in …