The plant peptidome: an expanding repertoire of structural features and biological functions

P Tavormina, B De Coninck, N Nikonorova… - The Plant …, 2015 - academic.oup.com
Peptides fulfill a plethora of functions in plant growth, development, and stress responses.
They act as key components of cell-to-cell communication, interfere with signaling and …

Peptide-based protease inhibitors from plants

R Hellinger, CW Gruber - Drug discovery today, 2019 - Elsevier
Highlights•The human proteasome is the second largest drug target class.•Few prototypic
proteases are standard tools for the discovery of novel inhibitors.•Peptide protease inhibitors …

Mechanisms of protein evolution

V Jayaraman, S Toledo‐Patiño, L Noda‐García… - Protein …, 2022 - Wiley Online Library
How do proteins evolve? How do changes in sequence mediate changes in protein
structure, and in turn in function? This question has multiple angles, ranging from …

Bowman-Birk inhibitors: Insights into family of multifunctional proteins and peptides with potential therapeutical applications

A Gitlin-Domagalska, A Maciejewska, D Dębowski - Pharmaceuticals, 2020 - mdpi.com
Bowman-Birk inhibitors (BBIs) are found primarily in seeds of legumes and in cereal grains.
These canonical inhibitors share a highly conserved nine-amino acids binding loop motif …

Sunflower trypsin Inhibitor‐1 (SFTI‐1): sowing seeds in the fields of chemistry and biology

SJ de Veer, AM White, DJ Craik - … Chemie International Edition, 2021 - Wiley Online Library
Nature‐derived cyclic peptides have proven to be a vast source of inspiration for advancing
modern pharmaceutical design and synthetic chemistry. The focus of this Review is …

Peptide macrocyclization by a bifunctional endoprotease

K Bernath-Levin, C Nelson, AG Elliott, AS Jayasena… - Chemistry & biology, 2015 - cell.com
Proteases usually cleave peptides, but under some conditions, they can ligate them. Seeds
of the common sunflower contain the 14-residue, backbone-macrocyclic peptide sunflower …

Discovery and optimization of peptide macrocycles

AM White, DJ Craik - Expert Opinion on Drug Discovery, 2016 - Taylor & Francis
Introduction: Macrocyclic peptides are generally more resistant to proteolysis and often have
higher potency than linear peptides and so they are excellent leads in drug design. Their …

Plant peptides–redefining an area of ribosomally synthesized and post-translationally modified peptides

JR Chekan, LS Mydy, MA Pasquale… - Natural Product …, 2024 - pubs.rsc.org
Covering 1965 to February 2024Plants are prolific peptide chemists and are known to make
thousands of different peptidic molecules. These peptides vary dramatically in their size …

[HTML][HTML] De novo peptide sequencing reveals many cyclopeptides in the human gut and other environments

B Behsaz, H Mohimani, A Gurevich, A Prjibelski… - Cell Systems, 2020 - cell.com
Cyclic and branch cyclic peptides (cyclopeptides) represent a class of bioactive natural
products that include many antibiotics and anti-tumor compounds. Despite the recent …

[HTML][HTML] Rational design of glycosaminoglycan binding cyclic peptides using cPEPmatch

BL Santini, M Gaardløs, D Wyrzykowski… - Computational and …, 2024 - Elsevier
Cyclic peptides present a robust platform for drug design, offering high specificity and
stability due to their conformationally constrained structures. In this study, we introduce an …