Protein–small molecule interactions in native mass spectrometry

JL Bennett, GTH Nguyen, WA Donald - Chemical Reviews, 2021 - ACS Publications
Small molecule drug discovery has been propelled by the continual development of novel
scientific methodologies to occasion therapeutic advances. Although established …

Top-down proteomics and the challenges of true proteoform characterization

A Po, CE Eyers - Journal of proteome research, 2023 - ACS Publications
Top-down proteomics (TDP) aims to identify and profile intact protein forms (proteoforms)
extracted from biological samples. True proteoform characterization requires that both the …

Tandem-trapped ion mobility spectrometry/mass spectrometry (t TIMS/MS): a promising analytical method for investigating heterogenous samples

FC Liu, ME Ridgeway, MA Park, C Bleiholder - Analyst, 2022 - pubs.rsc.org
Ion mobility spectrometry/mass spectrometry (IMS/MS) is widely used to study various levels
of protein structure. Here, we review the current state of affairs in tandem-trapped ion …

Top-down protein analysis by tandem-trapped ion mobility spectrometry/mass spectrometry (tandem-TIMS/MS) coupled with ultraviolet photodissociation (UVPD) and …

FC Liu, ME Ridgeway, CA Wootton… - Journal of the …, 2023 - ACS Publications
“Top-down” proteomics analyzes intact proteins and identifies proteoforms by their intact
mass as well as the observed fragmentation pattern in tandem mass spectrometry (MS/MS) …

Tandem trapped ion mobility spectrometry/mass spectrometry (tTIMS/MS) reveals sequence-specific determinants of top-down protein fragment ion cross sections

FC Liu, SR Kirk, KA Caldwell, T Pedrete… - Analytical …, 2022 - ACS Publications
Top-down proteomics provides a straightforward approach to the level of proteoforms but
remains technologically challenging. Using ion mobility spectrometry/mass spectrometry …

Tandem‐trapped ion mobility spectrometry/mass spectrometry coupled with ultraviolet photodissociation

FC Liu, ME Ridgeway, JSRV Winfred… - Rapid …, 2021 - Wiley Online Library
Rationale Tandem‐ion mobility spectrometry/mass spectrometry methods have recently
gained traction for the structural characterization of proteins and protein complexes …

Enhancing biomolecule analysis and 2DMS experiments by implementation of (activated ion) 193 nm UVPD on a FT-ICR mass spectrometer

A Theisen, CA Wootton, A Haris, TE Morgan… - Analytical …, 2022 - ACS Publications
Ultraviolet photodissociation is a fast, photon-mediated fragmentation method that yields
high sequence coverage and informative cleavages of biomolecules. In this work, 193 nm …

Fragment Ion Abundance Reveals Information about Structure and Charge Localization in Highly Charged Proteins

TA Shoff, RR Julian - Journal of the American Society for Mass …, 2023 - ACS Publications
Top-down mass spectrometry (MS) is a versatile tool that has been employed to investigate
both protein sequence and structure. Although a variety of different fragmentation methods …

193 nm ultraviolet photodissociation for the characterization of singly charged proteoforms generated by MALDI

KJ Zemaitis, M Zhou, W Kew… - Journal of the American …, 2023 - ACS Publications
MALDI imaging allows for the near-cellular profiling of proteoforms directly from microbial,
plant, and mammalian samples. Despite detecting hundreds of proteoforms, identification of …

Hydrophilic Interaction Chromatography Coupled to Ultraviolet Photodissociation Affords Identification, Localization, and Relative Quantitation of Glycans on Intact …

VK James, AAM van der Zon, EE Escobar… - Journal of Proteome …, 2024 - ACS Publications
Protein glycosylation is implicated in a wide array of diseases, yet glycoprotein analysis
remains elusive owing to the extreme heterogeneity of glycans, including …