Gaussian process regression for materials and molecules
VL Deringer, AP Bartók, N Bernstein… - Chemical …, 2021 - ACS Publications
We provide an introduction to Gaussian process regression (GPR) machine-learning
methods in computational materials science and chemistry. The focus of the present review …
methods in computational materials science and chemistry. The focus of the present review …
Machine learning for alloys
Alloy modelling has a history of machine-learning-like approaches, preceding the tide of
data-science-inspired work. The dawn of computational databases has made the integration …
data-science-inspired work. The dawn of computational databases has made the integration …
Choosing the right molecular machine learning potential
Quantum-chemistry simulations based on potential energy surfaces of molecules provide
invaluable insight into the physicochemical processes at the atomistic level and yield such …
invaluable insight into the physicochemical processes at the atomistic level and yield such …
Autonomous discovery in the chemical sciences part I: Progress
This two‐part Review examines how automation has contributed to different aspects of
discovery in the chemical sciences. In this first part, we describe a classification for …
discovery in the chemical sciences. In this first part, we describe a classification for …
“pySiRC”: Machine Learning Combined with Molecular Fingerprints to Predict the Reaction Rate Constant of the Radical-Based Oxidation Processes of Aqueous …
FO Sanches-Neto, JR Dias-Silva… - Environmental …, 2021 - ACS Publications
We developed a web application structured in a machine learning and molecular fingerprint
algorithm for the automatic calculation of the reaction rate constant of the oxidative …
algorithm for the automatic calculation of the reaction rate constant of the oxidative …
Representations of molecules and materials for interpolation of quantum-mechanical simulations via machine learning
Computational study of molecules and materials from first principles is a cornerstone of
physics, chemistry, and materials science, but limited by the cost of accurate and precise …
physics, chemistry, and materials science, but limited by the cost of accurate and precise …
Is distance matrix enough for geometric deep learning?
Abstract Graph Neural Networks (GNNs) are often used for tasks involving the 3D geometry
of a given graph, such as molecular dynamics simulation. While incorporating Euclidean …
of a given graph, such as molecular dynamics simulation. While incorporating Euclidean …
Efficient amino acid conformer search with Bayesian optimization
L Fang, E Makkonen, M Todorovic… - Journal of chemical …, 2021 - ACS Publications
Finding low-energy molecular conformers is challenging due to the high dimensionality of
the search space and the computational cost of accurate quantum chemical methods for …
the search space and the computational cost of accurate quantum chemical methods for …
Fast Near Ab Initio Potential Energy Surfaces Using Machine Learning
F Lu, L Cheng, RJ DiRisio, JM Finney… - The Journal of …, 2022 - ACS Publications
A machine-learning based approach for evaluating potential energies for quantum
mechanical studies of properties of the ground and excited vibrational states of small …
mechanical studies of properties of the ground and excited vibrational states of small …
Bayesian machine learning approach to the quantification of uncertainties on ab initio potential energy surfaces
This work introduces a novel methodology for the quantification of uncertainties associated
with potential energy surfaces (PESs) computed from first-principles quantum mechanical …
with potential energy surfaces (PESs) computed from first-principles quantum mechanical …