Global signatures of protein and mRNA expression levels

R de Sousa Abreu, LO Penalva, EM Marcotte… - Molecular …, 2009 - pubs.rsc.org
Cellular states are determined by differential expression of the cell's proteins. The
relationship between protein and mRNA expression levels informs about the combined …

A framework for understanding gene expression plasticity and its influence on stress tolerance

HE Rivera, HE Aichelman, JE Fifer… - Molecular …, 2021 - Wiley Online Library
Phenotypic plasticity can serve as a stepping stone towards adaptation. Recently, studies
have shown that gene expression contributes to emergent stress responses such as thermal …

Relationship between differentially expressed mRNA and mRNA-protein correlations in a xenograft model system

A Koussounadis, SP Langdon, IH Um, DJ Harrison… - Scientific reports, 2015 - nature.com
Differential mRNA expression studies implicitly assume that changes in mRNA expression
have biological meaning, most likely mediated by corresponding changes in protein levels …

Integrated analysis of transcriptomic and proteomic data

S Haider, R Pal - Current genomics, 2013 - ingentaconnect.com
Until recently, understanding the regulatory behavior of cells has been pursued through
independent analysis of the transcriptome or the proteome. Based on the central dogma, it …

Practical and robust identification of molecular subtypes in colorectal cancer by immunohistochemistry

A Trinh, K Trumpi, F De Sousa E Melo, X Wang… - Clinical cancer …, 2017 - AACR
Purpose: Recent transcriptomic analyses have identified four distinct molecular subtypes of
colorectal cancer with evident clinical relevance. However, the requirement for sufficient …

The progress of multi-omics technologies: determining function in lactic acid bacteria using a systems level approach

ST O'Donnell, RP Ross, C Stanton - Frontiers in microbiology, 2020 - frontiersin.org
Lactic Acid Bacteria (LAB) have long been recognized as having a significant impact
ranging from commercial to health domains. A vast amount of research has been carried out …

Disease-specific, neurosphere-derived cells as models for brain disorders

N Matigian, G Abrahamsen… - Disease models & …, 2010 - journals.biologists.com
There is a pressing need for patient-derived cell models of brain diseases that are relevant
and robust enough to produce the large quantities of cells required for molecular and …

Gene expression plasticity in response to salinity acclimation in threespine stickleback ecotypes from different salinity habitats

TC Gibbons, DCH Metzger, TM Healy… - Molecular …, 2017 - Wiley Online Library
Phenotypic plasticity is thought to facilitate the colonization of novel environments and
shape the direction of evolution in colonizing populations. However, the relative prevalence …

[HTML][HTML] EMT-like circulating tumor cells in ovarian cancer patients are enriched by platinum-based chemotherapy

I Chebouti, S Kasimir-Bauer, P Buderath… - Oncotarget, 2017 - ncbi.nlm.nih.gov
Background Assuming that tumor cell dissemination requires a shift to a mesenchymal
phenotype, we analyzed the incidence of epithelial-to-mesenchymal-transition (EMT)-like …

Chronic social stress during adolescence induces cognitive impairment in aged mice

V Sterlemann, G Rammes, M Wolf, C Liebl… - …, 2010 - Wiley Online Library
Age‐related cognitive decline is one of the major aspects that impede successful aging in
humans. Environmental factors, such as chronic stress, can accelerate or aggravate …