Exploring protein functions from structural flexibility using CABS‐flex modeling
Understanding protein function often necessitates characterizing the flexibility of protein
structures. However, simulating protein flexibility poses significant challenges due to the …
structures. However, simulating protein flexibility poses significant challenges due to the …
Aggrescan4D: A comprehensive tool for pH‐dependent analysis and engineering of protein aggregation propensity
Abstract Aggrescan4D (A4D) is an advanced computational tool designed for predicting
protein aggregation, leveraging structural information and the influence of pH. Building upon …
protein aggregation, leveraging structural information and the influence of pH. Building upon …
Aggrescan4D: structure-informed analysis of pH-dependent protein aggregation
O Bárcenas, A Kuriata, M Zalewski… - Nucleic Acids …, 2024 - academic.oup.com
Protein aggregation is behind the genesis of incurable diseases and imposes constraints on
drug discovery and the industrial production and formulation of proteins. Over the years, we …
drug discovery and the industrial production and formulation of proteins. Over the years, we …
From experimental studies to computational approaches: recent trends in designing novel therapeutics for amyloidogenesis
Amyloidosis is a condition marked by misfolded proteins that build up in tissues and
eventually destroy organs. It has been connected to a number of fatal illnesses, including …
eventually destroy organs. It has been connected to a number of fatal illnesses, including …
Machine learning for predicting protein properties: A comprehensive review
Y Wang, Y Zhang, X Zhan, Y He, Y Yang, L Cheng… - Neurocomputing, 2024 - Elsevier
In the field of protein engineering, the function and structure of proteins are key to
understanding cellular mechanisms, biological evolution, and biodiversity. With the …
understanding cellular mechanisms, biological evolution, and biodiversity. With the …
[HTML][HTML] Bioengineered self-assembled nanofibrils for high-affinity SARS-CoV-2 capture and neutralization
M Behbahanipour, S Navarro, O Bárcenas… - Journal of colloid and …, 2024 - Elsevier
The recent coronavirus disease 2019 (COVID-19) pandemic caused by the severe acute
respiratory syndrome coronavirus 2 (SARS-CoV-2) has spurred intense research efforts to …
respiratory syndrome coronavirus 2 (SARS-CoV-2) has spurred intense research efforts to …
[HTML][HTML] Aggregating amyloid resources: A comprehensive review of databases on amyloid-like aggregation
Protein aggregation is responsible for several degenerative conditions in humans, and it is
also a bottleneck in industrial protein production and storage of biotherapeutics …
also a bottleneck in industrial protein production and storage of biotherapeutics …
[HTML][HTML] Comparative modeling reveals the molecular determinants of aneuploidy fitness cost in a wild yeast model
J Rojas, J Hose, HA Dutcher, M Place, JF Wolters… - bioRxiv, 2024 - ncbi.nlm.nih.gov
Although implicated as deleterious in many organisms, aneuploidy can underlie rapid
phenotypic evolution. However, aneuploidy will only be maintained if the benefit outweighs …
phenotypic evolution. However, aneuploidy will only be maintained if the benefit outweighs …