Drug: H+ antiporters in chemical stress response in yeast

I Sá-Correia, SC dos Santos, MC Teixeira… - Trends in …, 2009 - cell.com
The emergence of widespread multidrug resistance (MDR) is a serious challenge for
therapeutics, food-preservation and crop protection. Frequently, MDR is a result of the action …

Applications of genome-scale metabolic network model in metabolic engineering

B Kim, WJ Kim, DI Kim, SY Lee - Journal of industrial …, 2015 - academic.oup.com
Genome-scale metabolic network model (GEM) is a fundamental framework in systems
metabolic engineering. GEM is built upon extensive experimental data and literature …

Fifteen years of large scale metabolic modeling of yeast: developments and impacts

T Österlund, I Nookaew, J Nielsen - Biotechnology advances, 2012 - Elsevier
Since the first large-scale reconstruction of the Saccharomyces cerevisiae metabolic
network 15years ago the development of yeast metabolic models has progressed rapidly …

MFS transporters required for multidrug/multixenobiotic (MD/MX) resistance in the model yeast: understanding their physiological function through post-genomic …

SC Dos Santos, MC Teixeira, PJ Dias… - Frontiers in …, 2014 - frontiersin.org
Multidrug/Multixenobiotic resistance (MDR/MXR) is a widespread phenomenon with clinical,
agricultural and biotechnological implications, where MDR/MXR transporters that are …

Biomass composition: the “elephant in the room” of metabolic modelling

D Dikicioglu, B Kırdar, SG Oliver - Metabolomics, 2015 - Springer
Genome-scale stoichiometric models, constrained to optimise biomass production are often
used to predict mutant phenotypes. However, for Saccharomyces cerevisiae, the …

Expanding a dynamic flux balance model of yeast fermentation to genome-scale

FA Vargas, F Pizarro, JR Pérez-Correa, E Agosin - BMC systems biology, 2011 - Springer
Background Yeast is considered to be a workhorse of the biotechnology industry for the
production of many value-added chemicals, alcoholic beverages and biofuels. Optimization …

Applications of computational modeling in metabolic engineering of yeast

EJ Kerkhoven, PJ Lahtvee, J Nielsen - FEMS yeast research, 2015 - academic.oup.com
Synthetic biology and metabolic engineering enable generation of novel cell factories that
efficiently convert renewable feedstocks into biofuels, bulk, and fine chemicals, thus creating …

Inactivation of the transcription factor mig1 (YGL035C) in Saccharomyces cerevisiae improves tolerance towards monocarboxylic weak acids: acetic, formic and …

VE Balderas-Hernández, K Correia… - Journal of Industrial …, 2018 - academic.oup.com
Toxic concentrations of monocarboxylic weak acids present in lignocellulosic hydrolyzates
affect cell integrity and fermentative performance of Saccharomyces cerevisiae. In this work …

Thirty years of the HAP2/3/4/5 complex

M Bolotin-Fukuhara - Biochimica et Biophysica Acta (BBA)-Gene …, 2017 - Elsevier
Thirty years of study of the HAP complex have provided a pretty good picture of the complex
components and put forward its original features. The HAP complex is a modular …

Bridging the gap between fluxomics and industrial biotechnology

X Feng, L Page, J Rubens, L Chircus… - BioMed Research …, 2010 - Wiley Online Library
Metabolic flux analysis is a vital tool used to determine the ultimate output of cellular
metabolism and thus detect biotechnologically relevant bottlenecks in productivity. 13C …