The rumen microbiome: balancing food security and environmental impacts

I Mizrahi, RJ Wallace, S Moraïs - Nature Reviews Microbiology, 2021 - nature.com
Ruminants produce edible products and contribute to food security. They house a complex
rumen microbial community that enables the host to digest their plant feed through microbial …

Mycobiome diversity: high-throughput sequencing and identification of fungi

RH Nilsson, S Anslan, M Bahram… - Nature Reviews …, 2019 - nature.com
Fungi are major ecological players in both terrestrial and aquatic environments by cycling
organic matter and channelling nutrients across trophic levels. High-throughput sequencing …

Role played by the environment in the emergence and spread of antimicrobial resistance (AMR) through the food chain

EFSA Panel on Biological Hazards (BIOHAZ)… - Efsa …, 2021 - Wiley Online Library
The role of food‐producing environments in the emergence and spread of antimicrobial
resistance (AMR) in EU plant‐based food production, terrestrial animals (poultry, cattle and …

Impacts of farmland application of antibiotic-contaminated manures on the occurrence of antibiotic residues and antibiotic resistance genes in soil: a meta-analysis …

Y Zhang, D Cheng, J Xie, Y Zhang, Y Wan, Y Zhang… - Chemosphere, 2022 - Elsevier
A meta-analysis of 94 published studies was conducted to explore the impacts of farmland
application of antibiotic-contaminated manures on antibiotic concentrations and ARG …

Distribution of antibiotic, heavy metals and antibiotic resistance genes in livestock and poultry feces from different scale of farms in Ningxia, China

S Peng, H Zhang, D Song, H Chen, X Lin… - Journal of Hazardous …, 2022 - Elsevier
With the rapid development of livestock and poultry breeding industries, pollution problems
caused by the discharge of animal feces have become increasingly severe. Nevertheless …

Antibiotics and antibiotic resistance from animal manures to soil: a review

WY Xie, Q Shen, FJ Zhao - European journal of soil science, 2018 - Wiley Online Library
The overuse of veterinary antibiotics in animal production and the subsequent land
applications of manures contribute to the elevated antibiotic resistance in the soil …

Antibiotic resistome in the livestock and aquaculture industries: Status and solutions

Y Zhao, QE Yang, X Zhou, FH Wang… - Critical Reviews in …, 2021 - Taylor & Francis
Since the introduction of antibiotics into clinical practices in the 1940s, antibiotics have
become an integral part of animal production to meet the increasing human demand for …

Antibiotics and antibiotic resistance genes in animal manure–consequences of its application in agriculture

M Zalewska, A Błażejewska, A Czapko… - Frontiers in …, 2021 - frontiersin.org
Antibiotic resistance genes (ARGs) are a relatively new type of pollutant. The rise in
antibiotic resistance observed recently is closely correlated with the uncontrolled and …

Temporal succession of soil antibiotic resistance genes following application of swine, cattle and poultry manures spiked with or without antibiotics

YJ Zhang, HW Hu, M Gou, JT Wang, D Chen… - Environmental Pollution, 2017 - Elsevier
Land application of animal manure is a common agricultural practice potentially leading to
dispersal and propagation of antibiotic resistance genes (ARGs) in environmental settings …

Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent

J Hultman, M Tamminen, K Pärnänen… - FEMS microbiology …, 2018 - academic.oup.com
Wastewater treatment plants (WWTPs) collect wastewater from various sources for a multi-
step treatment process. By mixing a large variety of bacteria and promoting their proximity …