Contingency and determinism in evolution: Replaying life's tape
BACKGROUND Evolution is a strongly historical process, and evolutionary biology is a field
that combines history and science. How the historical nature of evolution affects the …
that combines history and science. How the historical nature of evolution affects the …
(Non) parallel evolution
Parallel evolution across replicate populations has provided evolutionary biologists with
iconic examples of adaptation. When multiple populations colonize seemingly similar …
iconic examples of adaptation. When multiple populations colonize seemingly similar …
Viral quasispecies evolution
Evolution of RNA viruses occurs through disequilibria of collections of closely related mutant
spectra or mutant clouds termed viral quasispecies. Here we review the origin of the …
spectra or mutant clouds termed viral quasispecies. Here we review the origin of the …
Global epistasis makes adaptation predictable despite sequence-level stochasticity
Epistatic interactions between mutations can make evolutionary trajectories contingent on
the chance occurrence of initial mutations. We used experimental evolution in …
the chance occurrence of initial mutations. We used experimental evolution in …
[HTML][HTML] Quasispecies theory and the behavior of RNA viruses
AS Lauring, R Andino - PLoS pathogens, 2010 - journals.plos.org
A large number of medically important viruses, including HIV, hepatitis C virus, and
influenza, have RNA genomes. These viruses replicate with extremely high mutation rates …
influenza, have RNA genomes. These viruses replicate with extremely high mutation rates …
Negative epistasis between beneficial mutations in an evolving bacterial population
Epistatic interactions between mutations play a prominent role in evolutionary theories.
Many studies have found that epistasis is widespread, but they have rarely considered …
Many studies have found that epistasis is widespread, but they have rarely considered …
Experimental design, population dynamics, and diversity in microbial experimental evolution
In experimental evolution, laboratory-controlled conditions select for the adaptation of
species, which can be monitored in real time. Despite the current popularity of such …
species, which can be monitored in real time. Despite the current popularity of such …
Mutational and fitness landscapes of an RNA virus revealed through population sequencing
A Acevedo, L Brodsky, R Andino - Nature, 2014 - nature.com
RNA viruses exist as genetically diverse populations. It is thought that diversity and genetic
structure of viral populations determine the rapid adaptation observed in RNA viruses and …
structure of viral populations determine the rapid adaptation observed in RNA viruses and …
Evolution experiments with microorganisms: the dynamics and genetic bases of adaptation
Microorganisms have been mutating and evolving on Earth for billions of years. Now, a field
of research has developed around the idea of using microorganisms to study evolution in …
of research has developed around the idea of using microorganisms to study evolution in …
Evolutionary consequences of drug resistance: shared principles across diverse targets and organisms
D Hughes, DI Andersson - Nature Reviews Genetics, 2015 - nature.com
Drug therapy has a crucial role in the treatment of viral, bacterial, fungal and protozoan
infections, as well as the control of human cancer. The success of therapy is being …
infections, as well as the control of human cancer. The success of therapy is being …