Basic concepts of epigenetics: impact of environmental signals on gene expression

EA Mazzio, KFA Soliman - Epigenetics, 2012 - Taylor & Francis
Through epigenetic modifications, specific long-term phenotypic consequences can arise
from environmental influence on slowly evolving genomic DNA. Heritable epigenetic …

A history of why fathers' RNA matters

M Gòdia, G Swanson, SA Krawetz - Biology of Reproduction, 2018 - academic.oup.com
Having been debated for many years, the presence and role of spermatozoal RNAs is
resolving, and their contribution to development is now appreciated. Data from different …

A technical assessment of the porcine ejaculated spermatozoa for a sperm-specific RNA-seq analysis

M Gòdia, FQ Mayer, J Nafissi, A Castelló… - Systems Biology in …, 2018 - Taylor & Francis
The study of the boar sperm transcriptome by RNA-seq can provide relevant information on
sperm quality and fertility and might contribute to animal breeding strategies. However, the …

Treatment of male infertility

GD Palermo, J Kocent, D Monahan, QV Neri… - Human Fertility: Methods …, 2014 - Springer
Major difficulties exist in the accurate and meaningful diagnosis of male reproductive
dysfunction, and our understanding of the epidemiology and etiology of male infertility has …

Decondensing the protamine domain for transcription

RP Martins, SA Krawetz - Proceedings of the National …, 2007 - National Acad Sciences
Potentiation is the transition from higher-order, transcriptionally silent chromatin to a less
condensed state requisite to accommodating the molecular elements required for …

Understanding the spermatozoon

QV Neri, J Hu, Z Rosenwaks, GD Palermo - Human Fertility: Methods and …, 2014 - Springer
The former perception of the spermatozoon as a delivery device of the male genome has
been expanded to include a new understanding of the cell's complex role in fertilization …

[HTML][HTML] K-SPMM: a database of murine spermatogenic promoters modules & motifs

Y Lu, AE Platts, GC Ostermeier, SA Krawetz - BMC bioinformatics, 2006 - Springer
Background Understanding the regulatory processes that coordinate the cascade of gene
expression leading to male gamete development has proven challenging. Research has …

The KLAB toolbox: a suite of in-house software applications for epigenetic analysis

L Naismith, C Lalancette, AE Platts… - Systems Biology in …, 2008 - Taylor & Francis
Systems biology presents a new paradigm for elucidating the processes required to
organize and sustain life. We now have access to whole genome sequences, gene …

Epigenetics in Male Reproduction: A Practical Introduction to the Informatics of Next Generation Sequencing

AE Platts, C Lalancette, SA Krawetz - Epigenetics and Human …, 2011 - Springer
At fertilization, the male germ cell conveys a richly layered genetic landscape consisting of
both DNA and its associated epigenetic information. A systems level understanding of these …

[图书][B] Marflow: A scientific workflow system for computational detection of MARs in genomes

S Mahadev - 2008 - search.proquest.com
In biology, the nuclear matrix is the nuclear cytoskeleton. Matrix Attachment Regions (MAR)
are regions of the DNA attached to this nuclear matrix. These Matrix Attachment Regions is …