The interplay between diet and the gut microbiome: implications for health and disease
Diet has a pivotal role in shaping the composition, function and diversity of the gut
microbiome, with various diets having a profound impact on the stability, functionality and …
microbiome, with various diets having a profound impact on the stability, functionality and …
Gut OncoMicrobiome Signatures (GOMS) as next-generation biomarkers for cancer immunotherapy
Oncogenesis is associated with intestinal dysbiosis, and stool shotgun metagenomic
sequencing in individuals with this condition might constitute a non-invasive approach for …
sequencing in individuals with this condition might constitute a non-invasive approach for …
[HTML][HTML] A faecal microbiota signature with high specificity for pancreatic cancer
Background Recent evidence suggests a role for the microbiome in pancreatic ductal
adenocarcinoma (PDAC) aetiology and progression. Objective To explore the faecal and …
adenocarcinoma (PDAC) aetiology and progression. Objective To explore the faecal and …
Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals
The gut microbiome is shaped by diet and influences host metabolism; however, these links
are complex and can be unique to each individual. We performed deep metagenomic …
are complex and can be unique to each individual. We performed deep metagenomic …
PICRUSt2: An improved and extensible approach for metagenome inference
One major limitation of microbial community marker gene sequencing is that it does not
provide direct information on the functional composition of sampled communities. Here, we …
provide direct information on the functional composition of sampled communities. Here, we …
Codiversification of gut microbiota with humans
The gut microbiomes of human populations worldwide have many core microbial species in
common. However, within a species, some strains can show remarkable population …
common. However, within a species, some strains can show remarkable population …
Diet, gut microbiota and COVID-19
Worldwide, millions of individuals have been affected by the prevailing SARS-CoV-2.
Therefore, a robust immune system remains indispensable, as an immunocompromised …
Therefore, a robust immune system remains indispensable, as an immunocompromised …
Metabolic cross-feeding in imbalanced diets allows gut microbes to improve reproduction and alter host behaviour
SF Henriques, DB Dhakan, L Serra… - Nature …, 2020 - nature.com
The impact of commensal bacteria on the host arises from complex microbial-diet-host
interactions. Mapping metabolic interactions in gut microbial communities is therefore key to …
interactions. Mapping metabolic interactions in gut microbial communities is therefore key to …
Reconstruction of the personal information from human genome reads in gut metagenome sequencing data
Y Tomofuji, K Sonehara, T Kishikawa, Y Maeda… - Nature …, 2023 - nature.com
Human DNA present in faecal samples can result in a small number of human reads in gut
shotgun metagenomic sequencing data. However, it is presently unclear how much …
shotgun metagenomic sequencing data. However, it is presently unclear how much …
Western and non-western gut microbiomes reveal new roles of Prevotella in carbohydrate metabolism and mouth–gut axis
The abundance and diversity of host-associated Prevotella species have a profound impact
on human health. To investigate the composition, diversity, and functional roles of Prevotella …
on human health. To investigate the composition, diversity, and functional roles of Prevotella …