[HTML][HTML] Past, present, and future perspectives of environmental DNA (eDNA) metabarcoding: A systematic review in methods, monitoring, and applications of global …

KM Ruppert, RJ Kline, MS Rahman - Global Ecology and Conservation, 2019 - Elsevier
Environmental DNA (eDNA) metabarcoding is a novel method of assessing biodiversity
wherein samples are taken from the environment via water, sediment or air from which DNA …

Methodological trends and perspectives of animal dietary studies by noninvasive fecal DNA metabarcoding

H Ando, H Mukai, T Komura, T Dewi… - Environmental …, 2020 - Wiley Online Library
Fine‐scale estimation of trophic interactions is an important subject in the field of ecology.
Diet analysis based on fecal DNA metabarcoding has been accepted as a noninvasive …

Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?

BE Deagle, AC Thomas, JC McInnes… - Molecular …, 2019 - Wiley Online Library
Advances in DNA sequencing technology have revolutionized the field of molecular analysis
of trophic interactions, and it is now possible to recover counts of food DNA sequences from …

An assessment of minimum sequence copy thresholds for identifying and reducing the prevalence of artefacts in dietary metabarcoding data

LE Drake, JP Cuff, RE Young… - Methods in Ecology …, 2022 - Wiley Online Library
Metabarcoding provides a powerful tool for investigating biodiversity and trophic
interactions, but the high sensitivity of this methodology makes it vulnerable to errors …

Promises and pitfalls of using high‐throughput sequencing for diet analysis

A Alberdi, O Aizpurua, K Bohmann… - Molecular ecology …, 2019 - Wiley Online Library
The application of high‐throughput sequencing‐based approaches to DNA extracted from
environmental samples such as gut contents and faeces has become a popular tool for …

A paradigm shift in the trophic importance of jellyfish?

GC Hays, TK Doyle, JDR Houghton - Trends in ecology & evolution, 2018 - cell.com
The past 30 years have seen several paradigm shifts in our understanding of how ocean
ecosystems function. Now recent technological advances add to an overwhelming body of …

Regulatory changes in pterin and carotenoid genes underlie balanced color polymorphisms in the wall lizard

P Andrade, C Pinho… - Proceedings of the …, 2019 - National Acad Sciences
Reptiles use pterin and carotenoid pigments to produce yellow, orange, and red colors.
These conspicuous colors serve a diversity of signaling functions, but their molecular basis …

Marine ecosystem assessment for the Southern Ocean: birds and marine mammals in a changing climate

S Bestley, Y Ropert-Coudert… - Frontiers in Ecology …, 2020 - frontiersin.org
The massive number of seabirds (penguins and procellariiformes) and marine mammals
(cetaceans and pinnipeds)–referred to here as top predators–is one of the most iconic …

Human activity reduces niche partitioning among three widespread mesocarnivores

JA Smith, AC Thomas, T Levi, Y Wang, CC Wilmers - Oikos, 2018 - Wiley Online Library
Anthropogenic disturbances can constrain the realized niche space of wildlife by inducing
avoidance behaviors and altering community dynamics. Human activity might contribute to …

Advancing the integration of multi‐marker metabarcoding data in dietary analysis of trophic generalists

LP da Silva, VA Mata, PB Lopes… - Molecular Ecology …, 2019 - Wiley Online Library
The application of DNA metabarcoding to dietary analysis of trophic generalists requires
using multiple markers in order to overcome problems of primer specificity and bias …