Opportunities and obstacles for deep learning in biology and medicine

T Ching, DS Himmelstein… - Journal of the …, 2018 - royalsocietypublishing.org
Deep learning describes a class of machine learning algorithms that are capable of
combining raw inputs into layers of intermediate features. These algorithms have recently …

[HTML][HTML] Machine learning in healthcare

H Habehh, S Gohel - Current genomics, 2021 - ncbi.nlm.nih.gov
Abstract Recent advancements in Artificial Intelligence (AI) and Machine Learning (ML)
technology have brought on substantial strides in predicting and identifying health …

Application of artificial intelligence technology in oncology: Towards the establishment of precision medicine

R Hamamoto, K Suvarna, M Yamada, K Kobayashi… - Cancers, 2020 - mdpi.com
Simple Summary Artificial intelligence (AI) technology has been advancing rapidly in recent
years and is being implemented in society. The medical field is no exception, and the clinical …

Parameter prediction for unseen deep architectures

B Knyazev, M Drozdzal, GW Taylor… - Advances in …, 2021 - proceedings.neurips.cc
Deep learning has been successful in automating the design of features in machine learning
pipelines. However, the algorithms optimizing neural network parameters remain largely …

A survey on active deep learning: from model driven to data driven

P Liu, L Wang, R Ranjan, G He, L Zhao - ACM Computing Surveys …, 2022 - dl.acm.org
Which samples should be labelled in a large dataset is one of the most important problems
for the training of deep learning. So far, a variety of active sample selection strategies related …

Harnessing deep learning for population genetic inference

X Huang, A Rymbekova, O Dolgova, O Lao… - Nature Reviews …, 2024 - nature.com
In population genetics, the emergence of large-scale genomic data for various species and
populations has provided new opportunities to understand the evolutionary forces that drive …

Applications of machine learning to the problem of antimicrobial resistance: an emerging model for translational research

MN Anahtar, JH Yang, S Kanjilal - Journal of clinical microbiology, 2021 - Am Soc Microbiol
Antimicrobial resistance (AMR) remains one of the most challenging phenomena of modern
medicine. Machine learning (ML) is a subfield of artificial intelligence that focuses on the …

Machine learning for lung cancer diagnosis, treatment, and prognosis

Y Li, X Wu, P Yang, G Jiang… - Genomics, Proteomics and …, 2022 - academic.oup.com
The recent development of imaging and sequencing technologies enables systematic
advances in the clinical study of lung cancer. Meanwhile, the human mind is limited in …

Epigenetics analysis and integrated analysis of multiomics data, including epigenetic data, using artificial intelligence in the era of precision medicine

R Hamamoto, M Komatsu, K Takasawa, K Asada… - Biomolecules, 2019 - mdpi.com
To clarify the mechanisms of diseases, such as cancer, studies analyzing genetic mutations
have been actively conducted for a long time, and a large number of achievements have …

High dimensional, tabular deep learning with an auxiliary knowledge graph

C Ruiz, H Ren, K Huang… - Advances in Neural …, 2024 - proceedings.neurips.cc
Abstract Machine learning models exhibit strong performance on datasets with abundant
labeled samples. However, for tabular datasets with extremely high $ d $-dimensional …