[HTML][HTML] Computational processing of neural recordings from calcium imaging data

C Stringer, M Pachitariu - Current opinion in neurobiology, 2019 - Elsevier
Highlights•There are several promising techniques for processing calcium imaging
data.•Comparing the accuracy of these methods is difficult, due to lack of ground truth.•The …

[HTML][HTML] Analysis pipelines for calcium imaging data

EA Pnevmatikakis - Current opinion in neurobiology, 2019 - Elsevier
Calcium imaging is a popular tool among neuroscientists because of its capability to monitor
in vivo large neural populations across weeks with single neuron and single spike …

[HTML][HTML] Neural stem cell grafts form extensive synaptic networks that integrate with host circuits after spinal cord injury

S Ceto, KJ Sekiguchi, Y Takashima, A Nimmerjahn… - Cell stem cell, 2020 - cell.com
Neural stem/progenitor cell (NSPC) grafts can integrate into sites of spinal cord injury (SCI)
and generate neuronal relays across lesions that can provide functional benefit. To …

Parp1 promotes sleep, which enhances DNA repair in neurons

D Zada, Y Sela, N Matosevich, A Monsonego… - Molecular cell, 2021 - cell.com
The characteristics of the sleep drivers and the mechanisms through which sleep relieves
the cellular homeostatic pressure are unclear. In flies, zebrafish, mice, and humans, DNA …

Sleep increases chromosome dynamics to enable reduction of accumulating DNA damage in single neurons

D Zada, I Bronshtein, T Lerer-Goldshtein… - Nature …, 2019 - nature.com
Sleep is essential to all animals with a nervous system. Nevertheless, the core cellular
function of sleep is unknown, and there is no conserved molecular marker to define sleep …

Precision calcium imaging of dense neural populations via a cell-body-targeted calcium indicator

OA Shemesh, C Linghu, KD Piatkevich, D Goodwin… - Neuron, 2020 - cell.com
Methods for one-photon fluorescent imaging of calcium dynamics can capture the activity of
hundreds of neurons across large fields of view at a low equipment complexity and cost. In …

Brain-wide organization of neuronal activity and convergent sensorimotor transformations in larval zebrafish

X Chen, Y Mu, Y Hu, AT Kuan, M Nikitchenko… - Neuron, 2018 - cell.com
Simultaneous recordings of large populations of neurons in behaving animals allow detailed
observation of high-dimensional, complex brain activity. However, experimental approaches …

Whole-brain neuronal activity displays crackling noise dynamics

A Ponce-Alvarez, A Jouary, M Privat, G Deco… - Neuron, 2018 - cell.com
Previous studies suggest that the brain operates at a critical point in which phases of order
and disorder coexist, producing emergent patterned dynamics at all scales and optimizing …

[HTML][HTML] Radial astrocyte synchronization modulates the visual system during behavioral-state transitions

A Uribe-Arias, R Rozenblat, E Vinepinsky… - Neuron, 2023 - cell.com
Glial cells support the function of neurons. Recent evidence shows that astrocytes are also
involved in brain computations. To explore whether and how their excitable nature affects …

Embryos assist morphogenesis of others through calcium and ATP signaling mechanisms in collective teratogen resistance

A Tung, MM Sperry, W Clawson, A Pavuluri… - Nature …, 2024 - nature.com
Abstract Information for organismal patterning can come from a variety of sources. We
investigate the possibility that instructive influences for normal embryonic development are …