Patterns and processes of microbial community assembly

DR Nemergut, SK Schmidt, T Fukami… - Microbiology and …, 2013 - Am Soc Microbiol
Recent research has expanded our understanding of microbial community assembly.
However, the field of community ecology is inaccessible to many microbial ecologists …

Microbial ecology of the dark ocean above, at, and below the seafloor

BN Orcutt, JB Sylvan, NJ Knab… - … and molecular biology …, 2011 - Am Soc Microbiol
The majority of life on Earth—notably, microbial life—occurs in places that do not receive
sunlight, with the habitats of the oceans being the largest of these reservoirs. Sunlight …

Sinking particles promote vertical connectivity in the ocean microbiome

M Mestre, C Ruiz-González… - Proceedings of the …, 2018 - National Acad Sciences
The sinking of organic particles formed in the photic layer is a main vector of carbon export
into the deep ocean. Although sinking particles are heavily colonized by microbes, so far it …

Metagenomic analysis of size-fractionated picoplankton in a marine oxygen minimum zone

S Ganesh, DJ Parris, EF DeLong, FJ Stewart - The ISME journal, 2014 - academic.oup.com
Marine oxygen minimum zones (OMZs) support diverse microbial communities with roles in
major elemental cycles. It is unclear how the taxonomic composition and metabolism of OMZ …

Network topology reveals high connectance levels and few key microbial genera within soils

M Lupatini, AKA Suleiman, RJS Jacques… - Frontiers in …, 2014 - frontiersin.org
Microbes have a central role in soil global biogeochemical process, yet specific microbe–
microbe relationships are largely unknown. Analytical approaches as network analysis may …

Global diversity and biogeography of deep-sea pelagic prokaryotes

G Salazar, FM Cornejo-Castillo… - The ISME …, 2016 - academic.oup.com
The deep-sea is the largest biome of the biosphere, and contains more than half of the
whole ocean's microbes. Uncovering their general patterns of diversity and community …

Bacterial diversity and community composition from seasurface to subseafloor

EA Walsh, JB Kirkpatrick, SD Rutherford… - The ISME …, 2016 - academic.oup.com
We investigated compositional relationships between bacterial communities in the water
column and those in deep-sea sediment at three environmentally distinct Pacific sites (two in …

Marine bacteria: potential candidates for enhanced bioremediation

HR Dash, N Mangwani, J Chakraborty… - Applied microbiology …, 2013 - Springer
Bacteria are widespread in nature as they can adapt to any extreme environmental
conditions and perform various physiological activities. Marine environments are one of the …

Biodiversity and biogeography of the atmosphere

AM Womack, BJM Bohannan… - … Transactions of the …, 2010 - royalsocietypublishing.org
The variation of life has predominantly been studied on land and in water, but this focus is
changing. There is a resurging interest in the distribution of life in the atmosphere and the …

Censusing marine eukaryotic diversity in the twenty-first century

M Leray, N Knowlton - … of the Royal Society B: Biological …, 2016 - royalsocietypublishing.org
The ocean constitutes one of the vastest and richest biomes on our planet. Most recent
estimations, all based on indirect approaches, suggest that there are millions of marine …