Molecular Poltergeists: Mitochondrial DNA Copies (numts) in Sequenced Nuclear Genomes

E Hazkani-Covo, RM Zeller, W Martin - PLoS genetics, 2010 - journals.plos.org
The natural transfer of DNA from mitochondria to the nucleus generates nuclear copies of
mitochondrial DNA (numts) and is an ongoing evolutionary process, as genome sequences …

Virus world as an evolutionary network of viruses and capsidless selfish elements

EV Koonin, VV Dolja - Microbiology and Molecular Biology …, 2014 - Am Soc Microbiol
Viruses were defined as one of the two principal types of organisms in the biosphere,
namely, as capsid-encoding organisms in contrast to ribosome-encoding organisms, ie, all …

GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes

JJ Jin, WB Yu, JB Yang, Y Song, CW DePamphilis… - Genome biology, 2020 - Springer
GetOrganelle is a state-of-the-art toolkit to accurately assemble organelle genomes from
whole genome sequencing data. It recruits organelle-associated reads using a modified …

The alternative reality of plant mitochondrial DNA: One ring does not rule them all

A Kozik, BA Rowan, D Lavelle, L Berke… - PLoS …, 2019 - journals.plos.org
Plant mitochondrial genomes are usually assembled and displayed as circular maps based
on the widely-held view across the broad community of life scientists that circular genome …

[图书][B] The science of grapevines

M Keller - 2020 - books.google.com
The Science of Grapevines, Third Edition reflects the latest insights into cultivar
relationships, vascular transport, hormone action, and stress responses of grapevines …

Insights into the Evolution of Mitochondrial Genome Size from Complete Sequences of Citrullus lanatus and Cucurbita pepo (Cucurbitaceae)

AJ Alverson, XX Wei, DW Rice, DB Stern… - Molecular biology …, 2010 - academic.oup.com
The mitochondrial genomes of seed plants are unusually large and vary in size by at least
an order of magnitude. Much of this variation occurs within a single family, the …

Horizontal Transfer of Entire Genomes via Mitochondrial Fusion in the Angiosperm Amborella

DW Rice, AJ Alverson, AO Richardson, GJ Young… - Science, 2013 - science.org
We report the complete mitochondrial genome sequence of the flowering plant Amborella
trichopoda. This enormous, 3.9-megabase genome contains six genome equivalents of …

Organisation of the plant genome in chromosomes

JS Heslop‐Harrison, T Schwarzacher - The Plant Journal, 2011 - Wiley Online Library
The plant genome is organized into chromosomes that provide the structure for the genetic
linkage groups and allow faithful replication, transcription and transmission of the hereditary …

Origins and recombination of the bacterial-sized multichromosomal mitochondrial genome of cucumber

AJ Alverson, DW Rice, S Dickinson, K Barry… - The Plant …, 2011 - academic.oup.com
Members of the flowering plant family Cucurbitaceae harbor the largest known mitochondrial
genomes. Here, we report the 1685-kb mitochondrial genome of cucumber (Cucumis …

Plant mitochondrial genome diversity: the genomics revolution

JP Mower, DB Sloan, AJ Alverson - Plant genome diversity volume 1: plant …, 2012 - Springer
Mitochondrial genomes are remarkably diverse among green plants, and the explosion of
genome sequencing over the last 30 years has greatly expanded our understanding of this …