Microbial biogeography: putting microorganisms on the map

JBH Martiny, BJM Bohannan, JH Brown… - Nature Reviews …, 2006 - nature.com
We review the biogeography of microorganisms in light of the biogeography of
macroorganisms. A large body of research supports the idea that free-living microbial taxa …

Species divergence and the measurement of microbial diversity

CA Lozupone, R Knight - FEMS microbiology reviews, 2008 - academic.oup.com
Diversity measurement is important for understanding community structure and dynamics,
but has been particularly challenging for microorganisms. Microbial community …

Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

CL Lauber, M Hamady, R Knight… - Applied and …, 2009 - Am Soc Microbiol
Soils harbor enormously diverse bacterial populations, and soil bacterial communities can
vary greatly in composition across space. However, our understanding of the specific …

Spatial scale drives patterns in soil bacterial diversity

SL O'Brien, SM Gibbons, SM Owens… - Environmental …, 2016 - Wiley Online Library
Soil microbial communities are essential for ecosystem function, but linking community
composition to biogeochemical processes is challenging because of high microbial diversity …

Global patterns in the biogeography of bacterial taxa

DR Nemergut, EK Costello, M Hamady… - Environmental …, 2011 - Wiley Online Library
Bacteria control major nutrient cycles and directly influence plant, animal and human health.
However, we know relatively little about the forces shaping their large‐scale ecological …

Spatial scaling of microbial biodiversity

J Green, BJM Bohannan - Trends in ecology & evolution, 2006 - cell.com
A central goal in ecology is to understand the spatial scaling of biodiversity. Patterns in the
spatial distribution of organisms provide important clues about the underlying mechanisms …

A multivariate analysis of beta diversity across organisms and environments

J Soininen, JJ Lennon, H Hillebrand - Ecology, 2007 - Wiley Online Library
We examined variability in hierarchical beta diversity across ecosystems, geographical
gradients, and organism groups using multivariate spatial mixed modeling analysis of two …

Spatial scaling of functional gene diversity across various microbial taxa

J Zhou, S Kang, CW Schadt… - Proceedings of the …, 2008 - National Acad Sciences
Understanding the spatial patterns of organisms and the underlying mechanisms shaping
biotic communities is a central goal in community ecology. One of the most well documented …

Environmental and spatial control of freshwater diatoms—a review

J Soininen - Diatom research, 2007 - Taylor & Francis
The examination of correlates of diatom community structure has long been centred on local
environmental factors instead of broad-scale biogeographical factors largely because …

Diversity of Planctomycetes in Soil in Relation to Soil History and Environmental Heterogeneity

DH Buckley, V Huangyutitham, TA Nelson… - Applied and …, 2006 - Am Soc Microbiol
Members of the Planctomycetes, which were once thought to occur primarily in aquatic
environments, have been discovered in soils on five continents, revealing that these …